Apply QA for 2022 Content

[alackerbauer]

Q&A report can be found here: http://build.fhir.org/ig/cqframework/opioid-cds-r4/qa.html

[alackerbauer]

PR (not yet finished): https://github.com/cqframework/opioid-cds-r4/pull/342

cannot find value set that replaces

 <li><a href="ValueSet-medicationrequest-category-community.html">MedicationRequest Category Community</a></li>

i can only find it in the archive. was this replaced by another one or removed entirely?

[alackerbauer]

5 errors:

• [x] The link 'Library-OpioidCDSREC04_05.json.html' for "2022 CDC Clinical Practice Guideline library" cannot be resolved --> done

• [x] The link 'Bundle-opioidcds-10-patient-view-bundle.html' for "opioidcds-10-patient-view-bundle" cannot be resolved --> this will be automatically fixed once the new version of the quick start guide will be merged

• [x] The link 'ValueSet-medicationrequest-category-community.html' for "MedicationRequest Category Community" cannot be resolved --> cannot find alternative valueset (only this one in archive)

• [x] The link 'ValueSet-medicationrequest-status-active.html' for "MedicationRequest Status Active" cannot be resolved

• [x] The link 'ValueSet-urine-drug-screening-tests.html' for "Individual tests and panels of tests of urine for drugs of misuse" cannot be resolved

[alackerbauer]

I did a comparison of what is listed in input/pagecontent/terminology.xml and which value sets are present in input/vocabulary/valueset.

There is a discrepancy that I'd need feedback on before resolving the last 3 errors from the comment above:

This is what we have in the value set folder but not listed in the terminology.xml: --> should those be included to terminology.xml?

• Condition Encounter diagnosis category
• Synthetic opioid urine drug screening test
• Sickle cell diseasees
• Phencyclidine urine drug screening tests
• Opioid treatment assessment procedure
• Opiate specific urine drug screening tests
• Non-opioid cns depressant medications
• Methadone medications
• Methadone drug urine screening tests
• General opiate urine drug screening tests
• Conditions documenting sleep disordered breathing
• Cocaine urine drug screening
• Amphetamines class medications
• Amphetamine drug urine screening tests
• Alcohol drug urine screening tests

This is what is mentioned in the list in terminology.xml but cannot be found in the vocabulary folder:

• MedicationRequest Category Community
• MedicationRequest Status Active
• Action Indicators (not showing as QA error, so needs to be determined)
• Individual tests and panels of tests of urine for drugs of misuse

[alackerbauer]

try this for value sets: {% include list-simple-codesystems.xhtml %} check how it renders.

if not, add all valuesets from the valueset folder to the list.

also, add everything that was checked but not resolved for now to supporess warnings file.

[alackerbauer]

the include list-simple-codesystems.xhtml works generally speaking. It uses the ValueSet.title for the hyperlink texts. But the ValueSet titles aren't as speaking as the manually listed ones. E.g.:

ValueSet title: ValueSet - US Core Health Concern Condition Category Manually defined name (nowhere to be found in this ValueSet): Condition Category US Core Health Concern

[alackerbauer]

Tried to fix the QA warning for embedded HTML in valueMarkdown of a ValueSet's rulestest. Was not successful, neither escaping all special characters (e.g. to unicode), neither putting the code into a MD code block solved the problem. I worked with a JSON escaper: https://www.freeformatter.com/json-escape.html#before-output as well as manual unicode and markdown changes.

The only escaping that resolved the warning was a double-backslash before any special character: e.g. \\<WFE\\>--> but with that, the snippet cannot be copied anymore straight to rxmix.

[alackerbauer]

I have asked a zulip question about embedded XML inside markdown here - in short the answer is we won't be able to avoid this warning: https://chat.fhir.org/#narrow/stream/179252-IG-creation/topic/Warning.3A.20markdown.20with.20embedded.20HTML.20tag