Closed mattfidler closed 1 year ago
I thought there were some ODE
calculators in the list but I couldn't see them. nlmixr2::nlmixr2()
also supports ODE solving
Did you look under "differential equations"? The only package listed there ATM is mixesde
, since nlmeODE
was archived in May 2022. Stan can fit ODEs with random-effects parameters, of course, but I don't think there's a front-end for it ...
There is stanette and torstan as front ends to ode solving in stan. I can add them too
Yes please ...
Should I mention that nlmixr can run nlme models as a front end
Like nlmeode
might as well, as long as the comment is brief and useful.
stanette
was removed from CRAN. torstan
hasn't made it to CRAN yet, so I will refrain for now.
We were thinking about adding a "packages to watch" document (like these examples, packages that had been archived but could return or packages under development/not yet on CRAN), to check periodically ... (I think I'll add a separate issue for this).
I guess nlmixr2 also supports gaussian censored nonlinear mixed too
Thanks @bbolker
nlmixr2()
is also on CRAN and supports nonlinear mixed effects modeling coupled with ODE solving