jpiaskowski
commented
2 years ago - "Additive models" moved to "specialized models" (it was nested level ####, but unclear what it was under)
- "latent variable/mixed modeling" moved to "specialized models" from "Other"
- Substantial re-organization of remaining packages (in some cases, sub-categories were introduced, e.g. "Model Diagnostics")
- Note on assist removed since it is archived (and also cannot be found on GitHub)
- ZeligMultilevel was archived in 2016 so it was removed (also cannot be found on GitHub).
- lmeVarComp is no longer on CRAN and cannot be found on GitHub (except the CRAN mirror).
- lmeNBBayes is no longer on CRAN and cannot be found on GitHub (except the CRAN mirror)
- margins added to and MarginalMediation moved to "Inference/prediction and estimation"
- mvctm added to "inference/hypothesis testing"
- mvglmmRank was moved to "Generalized linear mixed models/linear"
- MCMC.qpcr moved to "Generalized linear mixed models/Bayesian"
- CpGassoc moved to "Model presentation and prediction" (it's not doing anything too special when it comes to mixed models)
- Phxnlme moved to "Commercial software interfaces"
- "robust variance-covariance estimates" section moved from "Derivatives" to "Specialized Models/Robust Estimation"
- section on "Overdispersed models" added as a subsection to "Specialized models"
- cubature removed because it seems like it does not belong?? Please correct if this was an error
- "Bioinformatics" section was removed once all the packages were relocated. It seemed like a very specific category to include in this. It would be difficult to maintain.
- multilevelmod added as a core package
- Data sets section expanded on and all those book links were added to the "links" section at the bottom.
- "## Links" changed to "### Links" because the ctv package relies on that exact heading level