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cran / WorldFlora

:exclamation: This is a read-only mirror of the CRAN R package repository. WorldFlora — Standardize Plant Names According to World Flora Online Taxonomic Backbone
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WorldFlora for genera #3

Open LukeLikesDirt opened 1 year ago

LukeLikesDirt commented 1 year ago

Hi Roeland

I am currently using the WorldFlora package to harmonise plant names across numerous datasets. Some datasets are entirely comprised of genus annotations. I just want to check that I am using the package correctly for when updating genus annotations.

Here is my code:

# Match the genera in FungalRoot database to WFO:
fungal_root_matched <-
  WFO.match(spec.data = gen_list,
            spec.name = "genus",
            WFO.data = WFO.data,
            Fuzzy.one = TRUE,
            counter = 1,
            verbose = TRUE) %>%
  # Reduce the dataset to the most up-to-date match
  WFO.one(., priority = "Accepted",
          spec.name = "scientificName",
          verbose = TRUE, counter = 1000) %>%
  glimpse()

Thank you for your time. Luke

gaborcsardi commented 1 year ago

Hi, this is a read only mirror of CRAN, please see the package authors in the DESCRIPTION file. Look for Maintainer, BugReports and URL. Thanks!