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crimBubble
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ECCsplorer
The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read data of amplified circular DNA.
GNU General Public License v3.0
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Problems on idx file, BLAST+ database file and " No high (potential) confidants eccDNA candidate regions found"
#16
hanssli
opened
2 months ago
5
Error: LENGTH or similar applied to NULL object during "Normalizing coverage data and editing Rscript for visualization." During test data run.
#15
janprovaz
opened
6 months ago
1
A error about encode
#14
fanch1122
closed
7 months ago
0
Does not work for human data: ValueError: all the input array dimensions for the concatenation axis must match exactly
#13
ShixiangWang
closed
1 year ago
19
Running ECCsplorer test-data and test-run
#12
Hessainekkeh
closed
1 year ago
6
ValueError: invalid literal for int() with base 10: b'1.37998e+06\n'
#11
liyugo
closed
1 year ago
4
ERROR: RepeatExplorer2 not found!
#10
inud3mon
closed
1 year ago
2
Error in Calculating Peaks in TR_map-all.COVERAGE Step
#9
liu-zhiyang
closed
1 year ago
2
TRIM_PATH checkup error when run test data
#8
liu-zhiyang
closed
1 year ago
3
process of creating environment was stuck
#7
Alirgnahs
closed
2 years ago
3
Known issues
#6
crimBubble
opened
2 years ago
6
Is ECCsplorer suitable for WGS?
#5
xflicsu
closed
2 years ago
1
Something bugs
#4
notchw
closed
2 years ago
2
lost my favorate eccDNA
#3
njaupan
closed
2 years ago
6
detect from bam file ?
#2
njaupan
closed
2 years ago
3
some suggestions
#1
panxiaoguang
closed
2 years ago
8