installation error in ubuntu16.04

[avijit1258]

I am trying to install Mo-phylogenetics. But due to some error is shown in the screenshot, I am not able to install it.

[cristianzambrano]

Hi Avijit Bhattacharjee

Please confirm the first and second step of the Instalation. MO-Phylogenetics requires the Bio++ (Bpp-Core, Bpp-Seq and Bpp-Phyl) libraries.

¿Can you confirm us if these steps were executed correctly ?

Cristian

[avijit1258]

Hello Cristian From my observation, I can ensure you

• Bio++ installed correctly
• PLL installation gives a compilation error.

Best regards Avijit

[cristianzambrano]

Hi Avijit The error message is indicating some about Bio++. We have checked the error. Have you defined others Library and Include directories?

Best regards, Cristian

[avijit1258]

Hello Cristian, I have attached the output of install.sh script and it is saying some problem in line 22. For installation, I am following this page http://khaos.uma.es/mophylogenetics/instructions.jsp. For your information, I have added directories to bashrc file as mentioned in the link.

mophyloerror.txt

Best regards, Avijit

[cristianzambrano]

Dear Avijit

MO-Phylogenetics requieres both librraries, Bio++ and PLL . The output file indicates there is a instalation error of PLL. Can you try installing PLL manually with this commands:

$SCRIPTPATH=Path of MO-Phylogenetics cd $SCRIPTPATH/lib/Pll autoreconf -fvi ./configure --prefix=$SCRIPTPATH/lib/Pll/src make make install

Best regards Cristian

[avijit1258]

Hello Cristian, I have attached the output of installing PLL installation command manually. It is showing same type of error. error.txt

Best regards, Avijit

[cristianzambrano]

Hi again dear Avijit

It is pretty weird, ¿what OS, version, compiler, cmake parameters are you using.?

[avijit1258]

Dear Cristian, My cmake version is - 3.5.1 OS - Ubuntu-16.04.3 g++ compiler version - 5.4.0 20160609.

Thanks for your patience.