cristoichkov / GBS_Bioinf_Process_Mamm

This repository contain the process to treat the reads obtained of GBS. -Clean -standardization parameters in ipyrad -analysis whit optimal parameter
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Runs mindepth parameter #15

Closed cristoichkov closed 5 years ago

cristoichkov commented 5 years ago

Runs mindepth_majrule and min_sample_locus

cristoichkov commented 5 years ago

The analysis broke when I restricted the mindepth parameter at 2 and 1. Because it uses more than 32 Gb of memory ram.

cristoichkov commented 5 years ago

I deleted mindepth_majrule equal to 1, because it did'n run on keri.