In case tissue prediction returns an empty set, command tissue_to__rois should manage it properly.
At this moment the following exception is raised:
Traceback (most recent call last):
File "/home/promort/app/ProMort/promort/manage.py", line 30, in
execute_from_command_line(sys.argv)
File "/usr/local/lib/python3.9/site-packages/django/core/management/init.py", line 401, in execute_from_command_line
utility.execute()
File "/usr/local/lib/python3.9/site-packages/django/core/management/init.py", line 395, in execute
self.fetch_command(subcommand).run_from_argv(self.argv)
File "/usr/local/lib/python3.9/site-packages/django/core/management/base.py", line 330, in run_from_argv
self.execute(*args, *cmd_options)
File "/usr/local/lib/python3.9/site-packages/django/core/management/base.py", line 371, in execute
output = self.handle(args, **options)
File "/home/promort/app/ProMort/promort/predictions_manager/management/commands/tissue2roi.py", line 75, in handle
shapes_coords = self._get_slice_coordinates(shapes)
File "/home/promort/app/ProMort/promort/predictions_manager/management/commands/tissue2roi.py", line 110, in _get_slice_coordinates
x_min = min([p.bounds[0] for p in polygons])
ValueError: min() arg is an empty sequence
mdrio
commented
2 years ago
In case tissue prediction returns an empty set, command tissue_to__rois should manage it properly. At this moment the following exception is raised:
Traceback (most recent call last): File "/home/promort/app/ProMort/promort/manage.py", line 30, in
execute_from_command_line(sys.argv)
File "/usr/local/lib/python3.9/site-packages/django/core/management/init.py", line 401, in execute_from_command_line
utility.execute()
File "/usr/local/lib/python3.9/site-packages/django/core/management/init.py", line 395, in execute
self.fetch_command(subcommand).run_from_argv(self.argv)
File "/usr/local/lib/python3.9/site-packages/django/core/management/base.py", line 330, in run_from_argv
self.execute(*args, *cmd_options)
File "/usr/local/lib/python3.9/site-packages/django/core/management/base.py", line 371, in execute
output = self.handle(args, **options)
File "/home/promort/app/ProMort/promort/predictions_manager/management/commands/tissue2roi.py", line 75, in handle
shapes_coords = self._get_slice_coordinates(shapes)
File "/home/promort/app/ProMort/promort/predictions_manager/management/commands/tissue2roi.py", line 110, in _get_slice_coordinates
x_min = min([p.bounds[0] for p in polygons])
ValueError: min() arg is an empty sequence