Hi,
I am having an issue with step 3, as shown below.
python microbeannotator_db_builder -d MicrobeAnnotator_DB -m blast -t 16 --light --step 3
2022-10-31 17:30:39,821 [INFO]: This is MicrobeAnnotator v2.0.5
2022-10-31 17:30:39,821 [INFO]: I will download and format the databases I use.
2022-10-31 17:30:39,822 [INFO]: Creating database folders
2022-10-31 17:30:39,822 [INFO]: Step 3
2022-10-31 17:30:47,727 [INFO]: Downloading SwissProt Fasta files
100% [........................................................................] 91303010 / 91303010Traceback (most recent call last):
File "microbeannotator_db_builder", line 445, in
main()
File "microbeannotator_db_builder", line 437, in main
single_step, aspera, keep_temp, bin_path)
File "microbeannotator_db_builder", line 105, in database_duilder
swissprot_fasta = uniprot.swissprot_fasta_downloader(database_directory)
File "C:\Users\sam-j\anaconda3\envs\microbeannotator\lib\site-packages\microbeannotator\database\uniprot_data_downloader.py", line 81, in swissprot_fasta_downloader
output_fasta.unlink()
File "C:\Users\sam-j\anaconda3\envs\microbeannotator\lib\pathlib.py", line 1309, in unlink
self._accessor.unlink(self)
PermissionError: [WinError 32] The process cannot access the file because it is being used by another process: 'MicrobeAnnotator_DB\protein_db\uniprot_sprot.fasta.gz'
I was wondering if anyone knows what's causing this issue and how to resolve it please?
Hi, I am having an issue with step 3, as shown below.
I was wondering if anyone knows what's causing this issue and how to resolve it please?
Many thanks, Sam