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cruizperez / MicrobeAnnotator

Pipeline for metabolic annotation of microbial genomes
Artistic License 2.0
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Is it possible to use MicrobeAnnotator for entire assemblies rather than genome #71

Open rzmabdallah opened 1 year ago

rzmabdallah commented 1 year ago

Is it possible to use MicrobeAnnotator for an entire metagenome assembly rather than Metagenome assembled genome or genome?

Thank you,

jorondo1 commented 1 year ago

I'm not sure I fully understand your question, but I think I might have the same. Can MicrobeAnnotator be used to estimate pathways completion by using all contigs from a metagenome (regardless of what genome they belong to)?