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cruizperez / MicrobeAnnotator

Pipeline for metabolic annotation of microbial genomes
Artistic License 2.0
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Microbeannotator database download error.. #74

Open sowptika opened 1 year ago

sowptika commented 1 year ago

Traceback (most recent call last): File "/home/adminuser/anaconda3/envs/microbeannotator/bin/microbeannotator_db_builder", line 18, in from microbeannotator.database import conversion_database_creator as convert File "/home/adminuser/anaconda3/envs/microbeannotator/lib/python3.7/site-packages/microbeannotator/database/conversion_database_creator.py", line 26, in import wget ModuleNotFoundError: No module named 'wget'

Hello Authors, I am facing the above error while creating the database. I am trying to install the Microbeannotator in server wherein I cannot download the aspera connect so using the flag --no_aspera. I checked for the presence of wget in my server and it is present in /usr/bin/wget. So not able to resolve this error. Please help me to solve this issue.

Thanking You Sincerely, Sowptika Pal

DininduSenanayake commented 1 year ago

@sowptika Looks like your python environment is missing wget . Can you install it with pip install wget which hopefully resolves the ModuleNotFoundError: No module named 'wget'