Is there a branch that offers a way to change module completeness threshold ?

cruizperez / MicrobeAnnotator

Pipeline for metabolic annotation of microbial genomes

Artistic License 2.0

133 stars 27 forks source link

Is there a branch that offers a way to change module completeness threshold ? #92

Open Louis-MG opened 6 months ago

Louis-MG commented 6 months ago

Hello ! I would like to produce a barplot and heatmap with different module completeness thresholds. I see it could be modified by adding a parameter used in plot_function_barplots and create_output_files. Is there any branch/version that implements this already, is there a plan to add it or should I go on with a pull request ? I don't think I have seen it.

Thank you very much!

Louis-MG commented 6 months ago

UPDATE: pull request added, works ! metabolic_summary__heatmap.pdf metabolic_summary__barplot.pdf