cryoem / eman2

A scientific image processing software suite with a focus on CryoEM and CryoET
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Parser refactor #534

Closed sludtke42 closed 3 years ago

sludtke42 commented 3 years ago

Yes, ok. I worry a little that there may be some embedded use of the single character abbreviations in some of the code which calls other programs. You might want to search for e2*py strings inside programs an make sure none of those calls make use of single character options. While doing this in one go is fine, I would like to proceed initially with the other refactoring one program at a time. Refactoring programs like e2proc2d should help us identify any shortcomings with our current refactoring plan. If we do everything at once, then discover a problem, we will have to remediate everything...