[DataCap Application] University of British Columbia Sunflower Genome Dataset

[joycejo4]

Version

1

DataCap Applicant

Joyce

Project ID

1

Data Owner Name

X-Bug | The Rieseberg Lab at the University of British Columbia

Data Owner Country/Region

United Kingdom

Data Owner Industry

Resources, Agriculture & Fisheries

Website

https://rieseberglab.github.io/ubc-sunflower-genome/

Social Media Handle

joyce

Social Media Type

Slack

What is your role related to the dataset

Data Preparer

Total amount of DataCap being requested

500

Unit for total amount of DataCap being requested

TiB

Expected size of single dataset (one copy)

67.2

Unit for expected size of single dataset

TiB

Number of replicas to store

7

Weekly allocation of DataCap requested

500

Unit for weekly allocation of DataCap requested

TiB

On-chain address for first allocation

f1avfkllpeqlx32bwjcka6y27scftpl5nzh754yly

Data Type of Application

Public, Open Dataset (Research/Non-Profit)

Custom multisig

• [ ] Use Custom Multisig

Identifier

No response

Share a brief history of your project and organization

This dataset captures Sunflower's genetic diversity originating from thousands of wild, cultivated, and landrace sunflower individuals distributed across North America. The data consists of raw sequences and associated botanical metadata, aligned sequences (to three different reference genomes), and sets of SNPs computed across several cohorts.

Is this project associated with other projects/ecosystem stakeholders?

No

If answered yes, what are the other projects/ecosystem stakeholders

No response

Describe the data being stored onto Filecoin

This dataset allows the genetic study of the germplasm (i.e. seed) of 2392 Sunflowers (a mix of wild, landrace, and cultivated varieties), from multiple species, collected from diverse ecosystems throughout North America. Plants were grown in a common garden experiment (in greenhouse), and then whole-genome-sequenced over a total of 3523 Illumina HiSeq runs. All the plants involved are associated with curated metadata in NCBI’s Short Read Archive (SRA), where the raw source data is currently available.

Where was the data currently stored in this dataset sourced from

AWS Cloud

If you answered "Other" in the previous question, enter the details here

No response

If you are a data preparer. What is your location (Country/Region)

Hong Kong

If you are a data preparer, how will the data be prepared? Please include tooling used and technical details?

After I finished downloading the dataset，I use lotus to make the data into car files. Then I transfer these files to SP online and by sending harddisk.

If you are not preparing the data, who will prepare the data? (Provide name and business)

No response

Has this dataset been stored on the Filecoin network before? If so, please explain and make the case why you would like to store this dataset again to the network. Provide details on preparation and/or SP distribution.

No response

Please share a sample of the data

s3://ubc-sunflower-genome/

Confirm that this is a public dataset that can be retrieved by anyone on the Network

• [X] I confirm

If you chose not to confirm, what was the reason

No response

What is the expected retrieval frequency for this data

Yearly

For how long do you plan to keep this dataset stored on Filecoin

1 to 1.5 years

In which geographies do you plan on making storage deals

Greater China, Asia other than Greater China, North America, South America, Europe

How will you be distributing your data to storage providers

HTTP or FTP server, Shipping hard drives

How did you find your storage providers

Slack, Big Data Exchange

If you answered "Others" in the previous question, what is the tool or platform you used

No response

Please list the provider IDs and location of the storage providers you will be working with.

f01074953 China
f02086562 Hubei
f02250267 Henan
f01520 Denmark
f02816050 USA
f03027241 HK

How do you plan to make deals to your storage providers

Lotus client

If you answered "Others/custom tool" in the previous question, enter the details here

No response

Can you confirm that you will follow the Fil+ guideline

Yes

[datacap-bot[bot]]

Application is waiting for allocator review

[joycejo4]

Because of the stfil's incident, there are some sps who stop working with us. So we changed other sps to work together.

Please review my application, thank you.

[joycejo4]

We need more time to do preparation. Please wait for some days.

[cryptoAmandaL]

@joycejo4 ok. If you want to continue, you can DM me via slack.

[cryptoAmandaL]

When I use allocator.tech to sign this application, it says 'Application error: a client-side exception has occurred (see the browser console for more information)'. So I'll try to sign it mannually for test.

[cryptoAmandaL]

@joycejo4 There's some bug in allocator.tech so that I can not allocate datacap. I will close this application. If you need more datacap, please reapply to me.