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cschwan / sage-on-gentoo

(Unofficial) Gentoo Overlay for Sage- and Sage-related ebuilds
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Add notebook useflag for dev-python/ipython #328

Closed pharpend closed 9 years ago

pharpend commented 9 years ago

Trying to install sage on a new computer (using ~amd64), I get this thing:

These are the packages that would be merged, in order:

Calculating dependencies  ... done!
[ebuild  N     ] sci-libs/suitesparseconfig-4.2.1  USE="-static-libs" 251 KiB
[ebuild  N     ] sci-mathematics/sage-baselayout-6.4::sage-on-gentoo  USE="X -debug -testsuite -tools" PYTHON_TARGETS="python2_7" 17,168 KiB
[ebuild  N     ] sci-libs/libcliquer-1.21_p1::sage-on-gentoo  98 KiB
[ebuild  N     ] sci-mathematics/lrcalc-1.1.7::sage-on-gentoo  USE="-static-libs" 296 KiB
[ebuild  N     ] sci-libs/symmetrica-2.0-r4::sage-on-gentoo  USE="-doc" 704 KiB
[ebuild  N     ] sci-mathematics/ratpoints-2.1.3-r4::sage-on-gentoo  USE="sse2 -doc" 203 KiB
[ebuild  N     ] sci-mathematics/optimal-20040603-r1::sage-on-gentoo  29 KiB
[ebuild  N     ] sci-mathematics/cubex-20060128::sage-on-gentoo  20 KiB
[ebuild  N     ] sci-mathematics/sage-data-elliptic_curves-0.7-r1::sage-on-gentoo  541 KiB
[ebuild  N     ] sci-mathematics/sage-data-polytopes_db-20120220::sage-on-gentoo  41 KiB
[ebuild  N     ] sci-mathematics/sage-data-combinatorial_designs-20140630::sage-on-gentoo  8 KiB
[ebuild  N     ] sci-mathematics/dikcube-20070912-r1::sage-on-gentoo  97 KiB
[ebuild  N     ] sci-mathematics/palp-2.1-r1::sage-on-gentoo  228 KiB
[ebuild  N     ] sci-mathematics/sage-data-graphs-20120404::sage-on-gentoo  280 KiB
[ebuild  N     ] dev-libs/mathjax-2.4  USE="-doc -examples" 22,509 KiB
[ebuild  N     ] dev-libs/libsodium-1.0.1:0/13  USE="asm urandom -minimal -static-libs" 1,614 KiB
[ebuild  N     ] app-arch/lz4-0_p120  USE="{-test} -valgrind" ABI_X86="(64) -32 (-x32)" 159 KiB
[ebuild  N     ] dev-libs/gf2x-1.1  USE="-bindist -static-libs" 486 KiB
[ebuild  N     ] sci-mathematics/pari-data-20120726  55,194 KiB
[ebuild  N     ] sci-libs/givaro-3.7.1::sage-on-gentoo  USE="-static-libs" 776 KiB
[ebuild  N     ] dev-libs/ppl-1.1:0/4.13  USE="cxx -doc -lpsol -pch -static-libs {-test}" 14,390 KiB
[ebuild  N     ] sci-mathematics/flintqs-20070817::sage-on-gentoo  35 KiB
[ebuild  N     ] dev-java/java-config-wrapper-0.16  8 KiB
[ebuild  N     ] sci-libs/fplll-4.0.4  USE="-static-libs" 404 KiB
[ebuild  N     ] sci-libs/mpfi-1.5.1  USE="-static-libs" 357 KiB
[ebuild  N     ] sci-mathematics/cu2-20060223::sage-on-gentoo  74 KiB
[ebuild  N     ] sci-mathematics/mcube-20051209::sage-on-gentoo  32 KiB
[ebuild  N     ] virtual/fortran-0  USE="openmp" 0 KiB
[ebuild  N     ] sys-apps/baselayout-java-0.1.0  71 KiB
[ebuild  N     ] media-fonts/stix-fonts-1.0.0-r1  USE="X -doc" 2,697 KiB
[ebuild  N     ] dev-libs/ntl-6.1.0  USE="-doc -static-libs {-test}" 699 KiB
[ebuild  N     ] sci-mathematics/flint-2.4.4-r2::sage-on-gentoo  USE="ntl -doc -gc -static-libs {-test}" 1,601 KiB
[ebuild  N     ] app-text/texi2html-5.0-r1  USE="unicode" 15,037 KiB
[ebuild  N     ] sci-libs/cddlib-094g  USE="-doc -static-libs" 1,351 KiB
[ebuild  N     ] sci-libs/libsingular-3.1.6-r4::sage-on-gentoo  USE="flint -boost -debug" 24,937 KiB
[ebuild  N     ] sci-libs/hdf5-1.8.14:0/1.8.14  USE="cxx fortran zlib -debug -examples -fortran2003 -mpi -static-libs -szip -threads" 9,281 KiB
[ebuild  N     ] sci-mathematics/gfan-0.5  1,109 KiB
[ebuild  N     ] sci-libs/m4ri-20140914::sage-on-gentoo  USE="openmp sse2 -debug -static-libs" 448 KiB
[ebuild  N     ] media-libs/gd-2.0.35-r4:2  USE="jpeg png truetype zlib -fontconfig -static-libs -xpm" ABI_X86="(64) -32 (-x32)" 1,185 KiB
[ebuild  N     ] sci-libs/amd-2.3.1  USE="fortran -doc -static-libs" 333 KiB
[ebuild  N     ] sci-libs/colamd-2.8.0  USE="-static-libs" 298 KiB
[ebuild  N     ] media-libs/audiofile-0.3.6-r1:0/1  USE="flac -static-libs {-test}" ABI_X86="(64) -32 (-x32)" 519 KiB
[ebuild   R    ] dev-libs/boehm-gc-7.4.2  USE="cxx threads* -static-libs" 0 KiB
[ebuild  N     ] sci-mathematics/glpk-4.54:0/36  USE="-doc -examples -gmp -mysql -odbc -static-libs" 3,026 KiB
[ebuild  N     ] sci-libs/cholmod-2.1.2  USE="-cuda -doc -lapack -metis -minimal -static-libs" 642 KiB
[ebuild  N     ] sci-libs/m4rie-20140914::sage-on-gentoo  USE="openmp -debug -static-libs" 456 KiB
[ebuild  N     ] dev-lisp/asdf-3.1.4:0/3.1.4  USE="-doc" 813 KiB
[ebuild  N     ] dev-lisp/uiop-3.1.4  0 KiB
[ebuild  N     ] dev-lisp/ecls-13.5.1-r1:0/13.5.1  USE="X sse threads unicode -debug -emacs -gengc -precisegc" 9,181 KiB
[ebuild  N     ] sci-mathematics/gap-4.7.5::sage-on-gentoo  USE="gmp readline -emacs -vim-syntax" 43,601 KiB
[ebuild  N     ] sci-mathematics/singular-3.1.6-r1::sage-on-gentoo  USE="python readline -boost -doc -emacs -examples -flint {-test}" PYTHON_TARGETS="python2_7" 10,372 KiB
[ebuild  N     ] app-misc/rlwrap-0.41  USE="-debug" 254 KiB
[ebuild  N     ] sci-libs/libgap-4.7.5-r1::sage-on-gentoo  USE="-static-libs" 1,254 KiB
[ebuild  N     ] dev-java/javatoolkit-0.3.0-r9  PYTHON_TARGETS="python2_7" 17 KiB
[ebuild  N     ] dev-python/mpmath-0.19  USE="-doc -examples -gmp -matplotlib {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 2,074 KiB
[ebuild  N     ] dev-python/sage-pexpect-2.0-r1::sage-on-gentoo  PYTHON_TARGETS="python2_7" 24 KiB
[ebuild  N     ] dev-python/pexpect-3.3  USE="-doc -examples {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -pypy3 -python3_4" 130 KiB
[ebuild  N     ] dev-python/pyparsing-2.0.3  USE="-doc -examples" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 1,429 KiB
[ebuild  N     ] sci-libs/zn_poly-0.9-r3::sage-on-gentoo  113 KiB
[ebuild  N     ] sci-libs/pynac-0.3.2-r1::sage-on-gentoo  USE="-static-libs" PYTHON_TARGETS="python2_7" 256 KiB
[ebuild  N     ] dev-python/gdmodule-0.56-r2  USE="jpeg png truetype -xpm" PYTHON_TARGETS="python2_7" 48 KiB
[ebuild  N     ] dev-python/webassets-0.10.1  PYTHON_TARGETS="python2_7 python3_3 -python3_4" 168 KiB
[ebuild  N     ] dev-python/blinker-1.3  USE="-doc {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 90 KiB
[ebuild  N     ] dev-python/python-openid-2.2.5-r1  USE="-examples -mysql -postgres -sqlite {-test}" PYTHON_TARGETS="python2_7" 294 KiB
[ebuild  N     ] dev-python/backports-1.0  PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 3 KiB
[ebuild  N     ] dev-python/sip-4.16.4:0/11  USE="-debug -doc" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 777 KiB
[ebuild  N     ] dev-python/pygments-2.0.1  USE="-doc {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -pypy3 -python3_4" 1,604 KiB
[ebuild  N     ] dev-python/decorator-3.4.0-r1  PYTHON_TARGETS="python2_7 python3_3 -python3_4" 30 KiB
[ebuild  N     ] dev-python/python-dateutil-2.2  USE="-examples" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 254 KiB
[ebuild  N     ] dev-python/numexpr-2.4  USE="-mkl" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 83 KiB
[ebuild  N     ] dev-python/python-pkgconfig-1.1.0::sage-on-gentoo  USE="{-test}" PYTHON_TARGETS="python2_7 python3_3" 5 KiB
[ebuild  N     ] dev-python/werkzeug-0.9.6  PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 1,102 KiB
[ebuild  N     ] dev-python/itsdangerous-0.24  PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 46 KiB
[ebuild  N     ] dev-python/speaklater-1.3-r1  USE="{-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 4 KiB
[ebuild  N     ] net-zope/zope-interface-4.1.1  PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 844 KiB
[ebuild  N     ] dev-python/characteristic-14.1.0  USE="-doc {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 25 KiB
[ebuild  N     ] dev-python/pyasn1-modules-0.0.5-r1  PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 38 KiB
[ebuild  N     ] dev-python/backports-ssl-match-hostname-3.4.0.2  PYTHON_TARGETS="python2_7 -pypy" 6 KiB
[ebuild  N     ] dev-python/certifi-14.05.14  PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 165 KiB
[ebuild  N     ] dev-python/simplegeneric-0.8.1-r1  PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 13 KiB
[ebuild  N     ] dev-python/flask-0.10.1-r2  USE="-doc -examples" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 532 KiB
[ebuild  N     ] www-servers/tornado-4.0.2  USE="-curl {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 309 KiB
[ebuild  N     ] dev-python/docutils-0.12  PYTHON_TARGETS="python2_7 python3_3 -pypy -pypy3 -python3_4" 1,581 KiB
[ebuild  N     ] app-admin/eselect-wxwidgets-20140423  7 KiB
[ebuild  N     ] dev-python/networkx-1.9.1  USE="-doc -examples {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 1,012 KiB
[ebuild  N     ] app-admin/eselect-cblas-0.1  0 KiB
[ebuild  N     ] app-admin/eselect-lapack-0.1  0 KiB
[ebuild  N     ] app-admin/eselect-blas-0.1  0 KiB
[ebuild  N     ] sci-libs/gsl-1.16  USE="-cblas-external -static-libs" 3,452 KiB
[ebuild  N     ] dev-python/sphinx-1.2.3::sage-on-gentoo  USE="-doc -latex {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 3,126 KiB
[ebuild  N     ] dev-python/flask-openid-1.2.4  USE="-doc -examples" PYTHON_TARGETS="python2_7" 42 KiB
[ebuild  N     ] dev-python/flask-oldsessions-0.10::sage-on-gentoo  PYTHON_TARGETS="python2_7" 8 KiB
[ebuild  N     ] dev-python/flask-silk-0.2::sage-on-gentoo  PYTHON_TARGETS="python2_7" 613 KiB
[ebuild  N     ] sci-libs/blas-reference-20070226-r2  USE="-doc" 5,208 KiB
[ebuild  N     ] virtual/cblas-1.0  0 KiB
[ebuild  N     ] virtual/blas-1.0  0 KiB
[ebuild  N     ] sci-mathematics/gmp-ecm-6.4.4-r2::sage-on-gentoo  USE="blas custom-tune -gwnum -openmp -static-libs {-test}" 920 KiB
[ebuild  N     ] dev-python/flask-autoindex-0.5::sage-on-gentoo  PYTHON_TARGETS="python2_7" 54 KiB
[ebuild  N     ] sci-mathematics/sage-doc-bin-6.4::sage-on-gentoo  USE="pdf -html" 50,158 KiB
[ebuild  N     ] sci-libs/iml-1.0.4::sage-on-gentoo  USE="-static-libs" 477 KiB
[ebuild  N     ] sci-libs/umfpack-5.6.2  USE="cholmod -doc -static-libs" 762 KiB
[ebuild  N     ] sci-libs/lapack-reference-3.2.1-r1  USE="-doc" 4,694 KiB
[ebuild  N     ] virtual/lapack-3.1  0 KiB
[ebuild  N     ] sci-libs/arpack-3.1.3-r1  USE="-doc -examples -mpi -static-libs" 1,269 KiB
[ebuild  N     ] sci-libs/dsdp-5.8-r2  USE="-doc -examples" 2,548 KiB
[ebuild  N     ] sci-libs/fflas-ffpack-1.6.0-r3::sage-on-gentoo  USE="-static-libs" 566 KiB
[ebuild  N     ] sci-libs/linbox-1.3.2::sage-on-gentoo  USE="sage -static-libs" 1,513 KiB
[ebuild  N     ] dev-python/cvxopt-1.1.7::sage-on-gentoo  USE="dsdp glpk -doc -examples -fftw -gsl" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 3,813 KiB
[ebuild   R    ] dev-lang/python-3.3.5-r1:3.3  USE="gdbm ipv6 ncurses readline sqlite* ssl threads xml -build -doc -examples -hardened -tk -wininst" 11,845 KiB
[ebuild  N     ] dev-python/pytz-2014.9  PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 163 KiB
[ebuild   R    ] dev-python/numpy-1.9.1  USE="lapack* -doc {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB
[ebuild  N     ] dev-python/sqlalchemy-0.9.8  USE="sqlite -doc -examples {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 3,985 KiB
[ebuild  N     ] dev-python/pillow-2.5.3-r1  USE="jpeg lcms tiff truetype zlib -doc -examples -jpeg2k -scanner {-test} -tk -webp" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 6,713 KiB
[ebuild  N     ] dev-java/java-config-2.2.0:2  PYTHON_TARGETS="python2_7 python3_3" 51 KiB
[ebuild  N     ] dev-python/Babel-1.3-r1  USE="-doc {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 3,322 KiB
[ebuild  N     ] virtual/python-imaging-2  USE="jpeg -tk" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 0 KiB
[ebuild  N     ] sci-libs/scipy-0.14.0-r1  USE="-doc -sparse {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 9,974 KiB
[ebuild  N     ] dev-python/flask-babel-0.8-r1  USE="-doc" PYTHON_TARGETS="python2_7" 44 KiB
[ebuild  N     ] dev-python/bottleneck-0.8.0  PYTHON_TARGETS="python2_7 python3_3 -python3_4" 1,597 KiB
[ebuild  N     ] dev-python/service_identity-14.0.0  USE="-doc {-test}" PYTHON_TARGETS="python2_7 python3_3 -pypy -python3_4" 26 KiB
[ebuild  N     ] app-admin/eselect-java-0.1.0  71 KiB
[ebuild  N     ] virtual/jdk-1.7.0:1.7  0 KiB
[ebuild  N     ] virtual/jre-1.7.0:1.7  0 KiB
[ebuild  N     ] dev-java/icedtea-bin-7.2.5.3:7  USE="X alsa cups -cjk -doc -examples -nsplugin (-selinux) -source -webstart" 54,414 KiB
[ebuild  N     ] dev-java/ant-core-1.9.2  USE="-doc -source" 3,338 KiB
[ebuild  N     ] sci-libs/vecmath-objectclub-1.14  74 KiB
[ebuild  N     ] dev-java/gnu-regexp-1.1.4-r2:1  USE="-doc -source" 161 KiB
[ebuild  N     ] java-virtuals/stax-api-1-r4  0 KiB
[ebuild  N     ] dev-java/antlr-2.7.7-r5  USE="cxx java python -debug -doc -examples -mono -script -source -static-libs" PYTHON_TARGETS="python2_7" 1,774 KiB
[ebuild  N     ] java-virtuals/jaf-1.1-r1  0 KiB
[ebuild  N     ] dev-java/junit-3.8.2-r1  USE="-doc -source" 451 KiB
[ebuild  N     ] dev-java/xml-commons-external-1.3.04:1.3  USE="-doc -source" 645 KiB
[ebuild  N     ] dev-java/commons-cli-1.2:1  USE="-doc -source {-test}" 67 KiB
[ebuild  N     ] sci-libs/jmol-acme-1.0  468 KiB
[ebuild  N     ] sci-libs/naga-2.1  22 KiB
[ebuild  N     ] dev-java/bcprov-1.45-r1:1.45  USE="-doc -source" 3,348 KiB
[ebuild  N     ] dev-java/saxpath-1.0-r2  USE="-doc -source {-test}" 2,116 KiB
[ebuild  N     ] dev-java/relaxng-datatype-1.0-r1  USE="-doc -source" 73 KiB
[ebuild  N     ] dev-java/sun-jaf-1.1.1  USE="-doc -source" 123 KiB
[ebuild  N     ] dev-java/java-getopt-1.0.14:1  USE="-doc -source" 45 KiB
[ebuild  N     ] dev-java/javacup-0.11a_beta20060608  USE="-doc -source" 280 KiB
[ebuild  N     ] dev-java/bcel-5.2-r2  USE="-doc -findbugs -source" 256 KiB
[ebuild  N     ] dev-java/xpp3-1.1.4c-r1  USE="-doc -source {-test}" 938 KiB
[ebuild  N     ] dev-java/log4j-1.2.16  USE="-doc -javamail -jms -jmx -source" 2,727 KiB
[ebuild  N     ] dev-java/xml-commons-external-1.4.01:1.4  USE="-doc -source" 668 KiB
[ebuild  N     ] dev-java/xml-commons-resolver-1.2  USE="-doc -source" 257 KiB
[ebuild  N     ] dev-java/xjavac-20110814:1  3 KiB
[ebuild  N     ] dev-java/tomcat-servlet-api-6.0.41:2.5  USE="-source" 3,508 KiB
[ebuild  N     ] dev-java/sun-javamail-1.4.3  USE="-doc -source" 1,148 KiB
[ebuild  N     ] dev-java/xerces-2.11.0:2  USE="-doc -examples -source" 1,751 KiB
[ebuild  N     ] java-virtuals/javamail-1.0-r2  0 KiB
[ebuild  N     ] dev-java/xalan-serializer-2.7.1  USE="-doc -source" 6,138 KiB
[ebuild  N     ] java-virtuals/servlet-api-2.5-r1:2.5  0 KiB
[ebuild  N     ] dev-java/xalan-2.7.1  USE="-doc -source" 0 KiB
[ebuild  N     ] dev-java/bcmail-1.45-r2:1.45  USE="-doc -source" 473 KiB
[ebuild  N     ] dev-java/xpp2-2.1.10-r1  USE="-doc -source" 2,257 KiB
[ebuild  N     ] dev-java/xsdlib-20090415  USE="-doc -source" 893 KiB
[ebuild  N     ] dev-db/hsqldb-1.8.1.3-r1  USE="-doc -source {-test}" 3,097 KiB
[ebuild  N     ] dev-java/itext-2.1.5-r2  USE="-cjk -doc -rtf -rups -source" 1,272 KiB
[ebuild  N     ] dev-java/ant-owanttask-1.3.2  1,144 KiB
[ebuild  N     ] dev-java/xmldb-20011111-r1  USE="-doc -source" 36 KiB
[ebuild  N     ] sci-chemistry/jspecview-1169-r1::sage-on-gentoo  USE="-applet" 49,040 KiB
[ebuild  N     ] dev-java/asm-2.0-r2:2::sage-on-gentoo  USE="-doc -source" 253 KiB
[ebuild  N     ] dev-java/jaxme-0.5.2-r1  USE="-doc -source" 5,351 KiB
[ebuild  N     ] dev-java/dom4j-1.6.1-r4:1  USE="-doc -source {-test}" 9,463 KiB
[ebuild  N     ] dev-java/jarjar-0.9:1  USE="-doc -source {-test}" 184 KiB
[ebuild  N     ] dev-java/xom-1.2.10  USE="-doc -examples -source" 11,643 KiB
[ebuild  N     ] dev-java/jdom-1.0-r4:1.0  USE="-doc -examples -source" 3,489 KiB
[ebuild  N     ] dev-java/jaxen-1.1.4:1.1  USE="-doc -examples -source {-test}" 263 KiB
[ebuild  N     ] dev-java/jdom-jaxen-1.0-r1:1.0  0 KiB
[ebuild  N     ] dev-java/saxon-6.5.5:6.5  USE="-doc -examples -source" 3,268 KiB
[ebuild  N     ] sci-chemistry/jmol-12.3.27::sage-on-gentoo  USE="client-only -vhosts" 37,788 KiB
[ebuild  N     ] sci-chemistry/jmol-applet-12.3.27::sage-on-gentoo  0 KiB
[ebuild  N     ] net-libs/zeromq-4.0.4-r1  USE="-pgm -static-libs {-test}" 2,100 KiB
[ebuild  N     ] dev-python/pyzmq-14.4.1  USE="-doc -examples -green {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 973 KiB
[ebuild  N     ] x11-apps/xhost-1.0.6  USE="ipv6" 131 KiB
[ebuild  N     ] dev-qt/qtdbus-4.8.6-r1:4  USE="exceptions (-aqua) -debug -pch" ABI_X86="(64) -32 (-x32)" 0 KiB
[ebuild   R    ] x11-base/xorg-server-1.16.2:0/1.16.1  USE="ipv6 nptl suid udev xorg xvfb* -dmx -doc -glamor -kdrive -minimal (-selinux) -static-libs -systemd -tslib -unwind -wayland -xnest" 0 KiB
[ebuild  N     ] media-gfx/tachyon-0.98.9-r2::sage-on-gentoo  USE="jpeg opengl png -doc -examples -mpi -threads" 3,197 KiB
[ebuild  N     ] dev-python/pyopengl-3.0.2-r1  USE="-tk" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 872 KiB
[ebuild  N     ] dev-python/sympy-0.7.4.1::sage-on-gentoo  USE="gtk opengl pdf png system-mpmath -doc -examples -imaging -ipython -latex -mathml -pyglet {-test} -texmacs -theano" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 6,673 KiB
[ebuild  N     ] sci-mathematics/pari-2.7.1-r1:0/4::sage-on-gentoo  USE="X data gmp qt4 -doc -fltk" 3,068 KiB
[ebuild  N     ] dev-qt/qtopengl-4.8.6-r1:4  USE="exceptions (-aqua) -debug -egl -pch -qt3support" ABI_X86="(64) -32 (-x32)" 0 KiB
[ebuild  N     ] dev-python/PyQt4-4.11.3  USE="X dbus opengl svg -debug -declarative -designer -doc -examples -help -kde -multimedia -phonon -script -scripttools -sql -testlib -webkit -xmlpatterns" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 10,860 KiB
[ebuild  N     ] sci-mathematics/eclib-20140805::sage-on-gentoo  USE="flint -boost -static-libs" 868 KiB
[ebuild  N     ] sci-mathematics/sage-clib-6.4::sage-on-gentoo  0 KiB
[ebuild  N     ] sci-mathematics/lcalc-1.23-r6::sage-on-gentoo  USE="pari" 626 KiB
[ebuild  N     ] sci-mathematics/sympow-1.018.1::sage-on-gentoo  2,138 KiB
[ebuild  N     ] dev-libs/c-blosc-1.3.5  USE="lz4 snappy zlib -hdf5 -static-libs {-test}" 227 KiB
[ebuild  N     ] dev-python/twisted-core-14.0.2  USE="crypt gtk -serial {-test}" PYTHON_TARGETS="python2_7" 1,100 KiB
[ebuild  N     ] dev-lang/R-3.1.2  USE="X cairo icu jpeg nls openmp png readline tiff -doc -java -lapack -minimal -perl (-prefix) -profile -static-libs -tk" 27,989 KiB
[ebuild  N     ] dev-python/pytables-3.1.1-r1  USE="-doc -examples" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 6,559 KiB
[ebuild  N     ] dev-python/twisted-web-14.0.2  USE="-soap" PYTHON_TARGETS="python2_7" 224 KiB
[ebuild  N     ] dev-python/twisted-names-14.0.2  PYTHON_TARGETS="python2_7" 87 KiB
[ebuild  N     ] dev-python/twisted-mail-14.0.2  PYTHON_TARGETS="python2_7" 154 KiB
[ebuild  N     ] media-libs/libsdl-1.2.15-r8  USE="X alsa joystick opengl pulseaudio sound video xinerama xv -aalib -custom-cflags -dga -fbcon -libcaca -nas -oss -static-libs -tslib" ABI_X86="(64) -32 (-x32)" 3,829 KiB
[ebuild  N     ] x11-libs/wxGTK-2.8.12.1-r1:2.8  USE="X opengl sdl tiff (-aqua) -debug -doc -gnome -gstreamer -odbc -pch" 30,578 KiB
[ebuild  N     ] x11-libs/wxGTK-3.0.1.1:3.0  USE="X libnotify opengl sdl tiff (-aqua) -debug -doc -gstreamer -webkit" 56,777 KiB
[ebuild  N     ] dev-python/wxpython-3.0.1.1:3.0  USE="cairo libnotify opengl -examples" PYTHON_TARGETS="python2_7" 0 KiB
[ebuild  N     ] sci-visualization/gnuplot-5.0_rc2  USE="X cairo gd qt4 readline wxwidgets (-aqua) -bitmap -doc -examples -ggi -latex -libcaca -libcerf -lua (-svga)" 4,767 KiB
[ebuild  N     ] dev-python/ipython-2.3.0  USE="notebook qt4 smp wxwidgets -doc -examples -matplotlib -mongodb -nbconvert -octave {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 11,635 KiB
[ebuild  N     ] dev-python/matplotlib-1.3.1  USE="cairo gtk qt4 wxwidgets -doc -examples -excel -fltk -gtk3 -latex -pyside {-test} -tk" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 41,175 KiB
[ebuild  N     ] sci-mathematics/maxima-5.34.1-r2::sage-on-gentoo  USE="X ecls nls unicode -clisp -clozurecl (-cmucl) -emacs -gcl -latex -sbcl -tk -xemacs" LINGUAS="-es -pt -pt_BR" 28,780 KiB
[ebuild  N     ] sci-mathematics/polybori-0.8.3-r2::sage-on-gentoo  USE="-doc -gd" PYTHON_TARGETS="python2_7" 2,128 KiB
[ebuild  N     ] dev-python/pandas-0.15.0  USE="-R -doc -examples -excel -html {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 4,377 KiB
[ebuild  N     ] dev-python/rpy-2.5.0-r1  USE="{-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 161 KiB
[ebuild  N     ] sci-mathematics/sage-6.4-r1::sage-on-gentoo  USE="-debug -latex -lrs -nauty -testsuite" PYTHON_TARGETS="python2_7" 6 KiB
[ebuild  N     ] sci-mathematics/sage-data-conway_polynomials-0.4-r2::sage-on-gentoo  216 KiB
[ebuild  N     ] sci-mathematics/sage-notebook-0.11.0::sage-on-gentoo  USE="java -server {-test}" PYTHON_TARGETS="python2_7" 6,020 KiB

Total: 209 packages (205 new, 4 reinstalls), Size of downloads: 848,167 KiB

The following USE changes are necessary to proceed:
 (see "package.use" in the portage(5) man page for more details)
# required by sci-mathematics/sage-6.4-r1::sage-on-gentoo
# required by sci-mathematics/sage-data-conway_polynomials-0.4-r2::sage-on-gentoo
>=dev-python/ipython-2.3.0 notebook

!!! All ebuilds that could satisfy "~dev-python/ipython-2.3.0[notebook,python_targets_python2_7(-)?,-python_single_target_python2_7(-)]" have been masked.
!!! One of the following masked packages is required to complete your request:
- dev-python/ipython-2.3.0::gentoo (masked by: )

(dependency required by "sci-mathematics/sage-6.4-r1::sage-on-gentoo" [ebuild])
(dependency required by "sci-mathematics/sage-notebook-0.11.0::sage-on-gentoo" [ebuild])
For more information, see the MASKED PACKAGES section in the emerge
man page or refer to the Gentoo Handbook.
kiwifb commented 9 years ago

OK I fixed the use flag, it is now in the package.use/sage that we provide with the overlay. I am a bit curious about the second message. Tell me if it persist.

pharpend commented 9 years ago

I ran emerge -pv sage, and all is well, so I think we can close this issue. emerge -jv sage still fails for me, but I think that's a separate issue. Matplotlib is the failing package, here's the build log:

 * Package:    dev-python/matplotlib-1.3.1
 * Repository: gentoo
 * Maintainer: python@gentoo.org
 * USE:        abi_x86_64 amd64 cairo elibc_glibc gtk kernel_linux python_targets_python2_7 python_targets_python3_3 qt4 userland_GNU wxwidgets
 * FEATURES:   distcc preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking matplotlib-1.3.1.tar.gz to /var/tmp/portage/dev-python/matplotlib-1.3.1/work
>>> Source unpacked in /var/tmp/portage/dev-python/matplotlib-1.3.1/work
>>> Preparing source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * Will copy sources from /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1
 * python3_3: copying to /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3
 * python2_7: copying to /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * python3_3: running distutils-r1_run_phase python_configure
 * python2_7: running distutils-r1_run_phase python_configure
 * python2_7: running distutils-r1_run_phase python_configure_all
>>> Source configured.
>>> Compiling source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * python3_3: running distutils-r1_run_phase python_compile
 * python2_7: running distutils-r1_run_phase python_compile
 * Scanning for an open DISPLAY to start Xvfb ...
 * Scanning for an open DISPLAY to start Xvfb ...
 * Starting Xvfb on $DISPLAY=1 ...
 * Starting Xvfb on $DISPLAY=2 ...
/usr/bin/python3.3 setup.py build build --build-lib=/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3/build/build/lib
/usr/bin/python2.7 setup.py build build --build-lib=/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7/build/build/lib
Xlib:  extension "RANDR" missing on display ":2".
============================================================================
Edit setup.cfg to change the build options

BUILDING MATPLOTLIB
            matplotlib: yes [1.3.1]
                python: yes [3.3.5 (default, Nov 27 2014, 22:32:16)  [GCC
                        4.8.3]]
              platform: yes [linux]

REQUIRED DEPENDENCIES AND EXTENSIONS
                 numpy: yes [version 1.9.1]
              dateutil: yes [using dateutil version 2.2]
               tornado: yes [using tornado version 4.0.2]
             pyparsing: yes [using pyparsing version 2.0.3]
                 pycxx: yes [Official versions of PyCXX are not compatible
                        with Python 3.x.  Using local copy]
                libagg: yes [pkg-config information for 'libagg' could not
                        be found. Using local copy.]
              freetype: yes [version 17.2.11]
                   png: yes [version 1.6.13]

OPTIONAL SUBPACKAGES
           sample_data: yes [installing]
              toolkits: yes [installing]
                 tests: yes [nose 0.11.1 or later is required to run the
                        matplotlib test suite]

OPTIONAL BACKEND EXTENSIONS
                macosx: no  [Mac OS-X only]
                qt4agg: no  [PyQt4 not found]
               gtk3agg: no  [gtk3agg backend does not work on Python 3]
             gtk3cairo: no  [skipping due to configuration]
                gtkagg: no  [skipping due to configuration]
                 tkagg: no  [skipping due to configuration]
                 wxagg: no  [skipping due to configuration]
                   gtk: no  [skipping due to configuration]
                   agg: yes [installing]
                 cairo: yes [installing, version 1.10.0]
             windowing: no  [Microsoft Windows only]

OPTIONAL LATEX DEPENDENCIES
                dvipng: no
           ghostscript: yes [version 9.15]
                 latex: no
               pdftops: yes [version 0.28.0]

============================================================================
                        * The following required packages can not be built:
                        * qt4agg
 * esetup.py: WARNING: 
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
============================================================================
Edit setup.cfg to change the build options

BUILDING MATPLOTLIB
            matplotlib: yes [1.3.1]
                python: yes [2.7.8 (default, Nov 27 2014, 21:33:05)  [GCC
                        4.8.3]]
              platform: yes [linux2]

REQUIRED DEPENDENCIES AND EXTENSIONS
                 numpy: yes [version 1.9.1]
              dateutil: yes [using dateutil version 2.2]
               tornado: yes [using tornado version 4.0.2]
             pyparsing: yes [using pyparsing version 2.0.3]
                 pycxx: yes [Couldn't import.  Using local copy.]
                libagg: yes [pkg-config information for 'libagg' could not
                        be found. Using local copy.]
              freetype: yes [version 17.2.11]
                   png: yes [version 1.6.13]

OPTIONAL SUBPACKAGES
           sample_data: yes [installing]
              toolkits: yes [installing]
                 tests: yes [nose 0.11.1 or later is required to run the
                        matplotlib test suite]

OPTIONAL BACKEND EXTENSIONS
                macosx: no  [Mac OS-X only]
                qt4agg: no  [PyQt4 not found]
               gtk3agg: no  [skipping due to configuration]
             gtk3cairo: no  [skipping due to configuration]
                gtkagg: yes [installing, Gtk: 2.24.25 pygtk: 2.24.0]
                 tkagg: no  [skipping due to configuration]
                 wxagg: yes [installing, version 3.0.1.1]
                   gtk: yes [installing, Gtk: 2.24.25 pygtk: 2.24.0]
                   agg: yes [installing]
                 cairo: yes [installing, version 1.10.0]
             windowing: no  [Microsoft Windows only]

OPTIONAL LATEX DEPENDENCIES
                dvipng: no
           ghostscript: yes [version 9.15]
                 latex: no
               pdftops: yes [version 0.28.0]

============================================================================
                        * The following required packages can not be built:
                        * qt4agg
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
/usr/lib/portage/python3.3/isolated-functions.sh: line 195: wait: `virtualmake: the wrap_setup distutils-r1_python_compile failed.': not a pid or valid job spec
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * esetup.py: WARNING: 
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
/usr/lib/portage/python3.3/isolated-functions.sh: line 195: wait: `virtualmake: the wrap_setup distutils-r1_python_compile failed.': not a pid or valid job spec
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
/usr/lib/portage/python3.3/isolated-functions.sh: line 226: kill: (5539) - No such process

The output of the emerge command:


These are the packages that would be merged, in order:

Calculating dependencies  ... done!
[ebuild  N     ] dev-python/matplotlib-1.3.1  USE="cairo gtk qt4 wxwidgets -doc -examples -excel -fltk -gtk3 -latex -pyside {-test} -tk" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB
[ebuild  N     ] dev-python/pandas-0.15.0  USE="-R -doc -examples -excel -html {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB
[ebuild  N     ] dev-python/rpy-2.5.0-r1  USE="{-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB
[ebuild  N     ] sci-mathematics/sage-6.4-r1::sage-on-gentoo  USE="-debug -latex -lrs -nauty -testsuite" PYTHON_TARGETS="python2_7" 0 KiB
[ebuild  N     ] sci-mathematics/sage-data-conway_polynomials-0.4-r2::sage-on-gentoo  0 KiB
[ebuild  N     ] sci-mathematics/sage-notebook-0.11.0::sage-on-gentoo  USE="java -server {-test}" PYTHON_TARGETS="python2_7" 0 KiB

Total: 6 packages (6 new), Size of downloads: 0 KiB
>>> Verifying ebuild manifests

>>> Jobs: 0 of 6 complete, 1 running                Load avg: 0.95, 2.04, 1.31
>>> Emerging (1 of 6) dev-python/matplotlib-1.3.1::gentoo
>>> Jobs: 0 of 6 complete, 1 running                Load avg: 0.95, 2.04, 1.31
>>> Failed to emerge dev-python/matplotlib-1.3.1, Log file:
>>> Jobs: 0 of 6 complete, 1 running                Load avg: 0.87, 2.01, 1.30
>>>  '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'
>>> Jobs: 0 of 6 complete, 1 running                Load avg: 0.87, 2.01, 1.30
>>> Jobs: 0 of 6 complete, 1 running, 1 failed      Load avg: 0.87, 2.01, 1.30
>>> Jobs: 0 of 6 complete, 1 failed                 Load avg: 0.87, 2.01, 1.30

 * Package:    dev-python/matplotlib-1.3.1
 * Repository: gentoo
 * Maintainer: python@gentoo.org
 * USE:        abi_x86_64 amd64 cairo elibc_glibc gtk kernel_linux python_targets_python2_7 python_targets_python3_3 qt4 userland_GNU wxwidgets
 * FEATURES:   distcc preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking matplotlib-1.3.1.tar.gz to /var/tmp/portage/dev-python/matplotlib-1.3.1/work
>>> Source unpacked in /var/tmp/portage/dev-python/matplotlib-1.3.1/work
>>> Preparing source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * Will copy sources from /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1
 * python3_3: copying to /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3
 * python2_7: copying to /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * python3_3: running distutils-r1_run_phase python_configure
 * python2_7: running distutils-r1_run_phase python_configure
 * python2_7: running distutils-r1_run_phase python_configure_all
>>> Source configured.
>>> Compiling source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * python3_3: running distutils-r1_run_phase python_compile
 * python2_7: running distutils-r1_run_phase python_compile
 * Scanning for an open DISPLAY to start Xvfb ...
 * Scanning for an open DISPLAY to start Xvfb ...
 * Starting Xvfb on $DISPLAY=1 ...
 * Starting Xvfb on $DISPLAY=1 ...
/usr/bin/python3.3 setup.py build build --build-lib=/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3/build/build/lib
/usr/bin/python2.7 setup.py build build --build-lib=/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7/build/build/lib
Xlib:  extension "RANDR" missing on display ":1".
============================================================================
Edit setup.cfg to change the build options

BUILDING MATPLOTLIB
            matplotlib: yes [1.3.1]
                python: yes [3.3.5 (default, Nov 27 2014, 22:32:16)  [GCC
                        4.8.3]]
              platform: yes [linux]

REQUIRED DEPENDENCIES AND EXTENSIONS
                 numpy: yes [version 1.9.1]
              dateutil: yes [using dateutil version 2.2]
               tornado: yes [using tornado version 4.0.2]
             pyparsing: yes [using pyparsing version 2.0.3]
                 pycxx: yes [Official versions of PyCXX are not compatible
                        with Python 3.x.  Using local copy]
                libagg: yes [pkg-config information for 'libagg' could not
                        be found. Using local copy.]
              freetype: yes [version 17.2.11]
                   png: yes [version 1.6.13]

OPTIONAL SUBPACKAGES
           sample_data: yes [installing]
              toolkits: yes [installing]
                 tests: yes [nose 0.11.1 or later is required to run the
                        matplotlib test suite]

OPTIONAL BACKEND EXTENSIONS
                macosx: no  [Mac OS-X only]
                qt4agg: no  [PyQt4 not found]
               gtk3agg: no  [gtk3agg backend does not work on Python 3]
             gtk3cairo: no  [skipping due to configuration]
                gtkagg: no  [skipping due to configuration]
                 tkagg: no  [skipping due to configuration]
                 wxagg: no  [skipping due to configuration]
                   gtk: no  [skipping due to configuration]
                   agg: yes [installing]
                 cairo: yes [installing, version 1.10.0]
             windowing: no  [Microsoft Windows only]

OPTIONAL LATEX DEPENDENCIES
                dvipng: no
           ghostscript: yes [version 9.15]
                 latex: no
               pdftops: yes [version 0.28.0]

============================================================================
                        * The following required packages can not be built:
                        * qt4agg
 * esetup.py: WARNING: 
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
============================================================================
Edit setup.cfg to change the build options

BUILDING MATPLOTLIB
            matplotlib: yes [1.3.1]
                python: yes [2.7.8 (default, Nov 27 2014, 21:33:05)  [GCC
                        4.8.3]]
              platform: yes [linux2]

REQUIRED DEPENDENCIES AND EXTENSIONS
                 numpy: yes [version 1.9.1]
              dateutil: yes [using dateutil version 2.2]
               tornado: yes [using tornado version 4.0.2]
             pyparsing: yes [using pyparsing version 2.0.3]
                 pycxx: yes [Couldn't import.  Using local copy.]
                libagg: yes [pkg-config information for 'libagg' could not
                        be found. Using local copy.]
              freetype: yes [version 17.2.11]
                   png: yes [version 1.6.13]

OPTIONAL SUBPACKAGES
           sample_data: yes [installing]
              toolkits: yes [installing]
                 tests: yes [nose 0.11.1 or later is required to run the
                        matplotlib test suite]

OPTIONAL BACKEND EXTENSIONS
                macosx: no  [Mac OS-X only]
                qt4agg: no  [PyQt4 not found]
               gtk3agg: no  [skipping due to configuration]
             gtk3cairo: no  [skipping due to configuration]
                gtkagg: yes [installing, Gtk: 2.24.25 pygtk: 2.24.0]
                 tkagg: no  [skipping due to configuration]
                 wxagg: yes [installing, version 3.0.1.1]
                   gtk: yes [installing, Gtk: 2.24.25 pygtk: 2.24.0]
                   agg: yes [installing]
                 cairo: yes [installing, version 1.10.0]
             windowing: no  [Microsoft Windows only]

OPTIONAL LATEX DEPENDENCIES
                dvipng: no
           ghostscript: yes [version 9.15]
                 latex: no
               pdftops: yes [version 0.28.0]

============================================================================
                        * The following required packages can not be built:
                        * qt4agg
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
/usr/lib/portage/python3.3/isolated-functions.sh: line 195: wait: `virtualmake: the wrap_setup distutils-r1_python_compile failed.': not a pid or valid job spec
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
 * esetup.py: WARNING: 
cat: /tmp/.X1-lock: No such file or directory
kill: usage: kill [-s sigspec | -n signum | -sigspec] pid | jobspec ... or kill -l [sigspec]
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
/usr/lib/portage/python3.3/isolated-functions.sh: line 195: wait: `virtualmake: the wrap_setup distutils-r1_python_compile failed.': not a pid or valid job spec
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
/usr/lib/portage/python3.3/isolated-functions.sh: line 226: kill: (9344) - No such process
 * Messages for package dev-python/matplotlib-1.3.1:
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'

Here's my emerge --info:

Portage 2.2.14 (python 3.3.5-final-0, default/linux/amd64/13.0/desktop, gcc-4.8.3, glibc-2.20, 3.17.4-gentoo x86_64)
=================================================================
System uname: Linux-3.17.4-gentoo-x86_64-Intel-R-_Core-TM-_i5-3320M_CPU_@_2.60GHz-with-gentoo-2.2
KiB Mem:    16163856 total,   9715976 free
KiB Swap:   25165820 total,  25165820 free
Timestamp of tree: Wed, 26 Nov 2014 15:30:01 +0000
ld GNU ld (Gentoo 2.24 p1.4) 2.24
distcc 3.2rc1 x86_64-pc-linux-gnu [enabled]
app-shells/bash:          4.3_p30-r1
dev-java/java-config:     2.2.0
dev-lang/perl:            5.20.1-r2
dev-lang/python:          2.7.8, 3.3.5-r1, 3.4.2
dev-util/cmake:           3.0.2
dev-util/pkgconfig:       0.28-r2
sys-apps/baselayout:      2.2
sys-apps/openrc:          0.13.5
sys-apps/sandbox:         2.6-r1
sys-devel/autoconf:       2.69
sys-devel/automake:       1.11.6-r1, 1.13.4, 1.14.1
sys-devel/binutils:       2.24-r3
sys-devel/gcc:            4.8.3
sys-devel/gcc-config:     1.8
sys-devel/libtool:        2.4.3-r2
sys-devel/make:           4.1-r1
sys-kernel/linux-headers: 3.17-r1 (virtual/os-headers)
sys-libs/glibc:           2.20
Repositories: gentoo angelos betagarden causelay drdim mv mva raiagent sage-on-gentoo rion
ACCEPT_KEYWORDS="amd64 ~amd64"
ACCEPT_LICENSE="* -@EULA"
CBUILD="x86_64-pc-linux-gnu"
CFLAGS="-O2 -pipe -march=native"
CHOST="x86_64-pc-linux-gnu"
CONFIG_PROTECT="/etc /usr/share/gnupg/qualified.txt /var/lib/hsqldb"
CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/fonts/fonts.conf /etc/gconf /etc/gentoo-release /etc/revdep-rebuild /etc/sandbox.d /etc/terminfo"
CXXFLAGS="-O2 -pipe -march=native"
DISTDIR="/usr/portage/distfiles"
FCFLAGS="-O2 -pipe"
FEATURES="assume-digests binpkg-logs config-protect-if-modified distcc distlocks ebuild-locks fixlafiles merge-sync news parallel-fetch preserve-libs protect-owned sandbox sfperms strict unknown-features-warn unmerge-logs unmerge-orphans userfetch userpriv usersandbox usersync"
FFLAGS="-O2 -pipe"
GENTOO_MIRRORS="http://mirror.usu.edu/mirrors/gentoo/ rsync://rsync.gtlib.gatech.edu/gentoo"
LANG="en_US.utf8"
LDFLAGS="-Wl,-O1 -Wl,--as-needed"
MAKEOPTS="-j17 -l4"
PKGDIR="/usr/portage/packages"
PORTAGE_CONFIGROOT="/"
PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times --omit-dir-times --compress --force --whole-file --delete --stats --human-readable --timeout=180 --exclude=/distfiles --exclude=/local --exclude=/packages"
PORTAGE_TMPDIR="/var/tmp"
PORTDIR="/usr/portage"
PORTDIR_OVERLAY="/var/lib/layman/angelos /var/lib/layman/betagarden /var/lib/layman/causelay /var/lib/layman/drdim /var/lib/layman/mv /var/lib/layman/mva /var/lib/layman/raiagent /var/lib/layman/sage-on-gentoo /var/lib/layman/rion"
USE="X a52 aac acl acpi alsa amd64 berkdb bluetooth branding bzip2 cairo cdda cdr clang cli consolekit cracklib crypt cups cxx dbus dri dts dvd dvdr emboss encode exif fam flac fortran gdbm gif gnome-keyring gpm gtk iconv icu ipv6 jpeg lcms ldap libnotify lprng-compat mad mmx mng modules mp3 mp4 mpeg multilib ncurses networkmanager nls nptl ogg opengl openmp pam pango pcre pdf png policykit ppds pulseaudio python qt4 readline sdl session spell sse sse2 ssl startup-notification svg tcpd tiff truetype udev udisks unicode upower usb vorbis wxwidgets x264 xcb xetex xft xinerama xml xv xvid zlib" ABI_X86="64" ALSA_CARDS="ali5451 als4000 atiixp atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx via82xx-modem ymfpci" APACHE2_MODULES="authn_core authz_core socache_shmcb unixd actions alias auth_basic authn_alias authn_anon authn_dbm authn_default authn_file authz_dbm authz_default authz_groupfile authz_host authz_owner authz_user autoindex cache cgi cgid dav dav_fs dav_lock deflate dir disk_cache env expires ext_filter file_cache filter headers include info log_config logio mem_cache mime mime_magic negotiation rewrite setenvif speling status unique_id userdir usertrack vhost_alias" CALLIGRA_FEATURES="kexi words flow plan sheets stage tables krita karbon braindump author" CAMERAS="ptp2" COLLECTD_PLUGINS="df interface irq load memory rrdtool swap syslog" ELIBC="glibc" GPSD_PROTOCOLS="ashtech aivdm earthmate evermore fv18 garmin garmintxt gpsclock itrax mtk3301 nmea ntrip navcom oceanserver oldstyle oncore rtcm104v2 rtcm104v3 sirf superstar2 timing tsip tripmate tnt ublox ubx" INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" LIBREOFFICE_EXTENSIONS="presenter-console presenter-minimizer" LINGUAS="en de eo" OFFICE_IMPLEMENTATION="libreoffice" PHP_TARGETS="php5-5" PYTHON_SINGLE_TARGET="python2_7" PYTHON_TARGETS="python2_7 python3_3" RUBY_TARGETS="ruby19 ruby20 ruby21" USERLAND="GNU" VIDEO_CARDS="intel" XTABLES_ADDONS="quota2 psd pknock lscan length2 ipv4options ipset ipp2p iface geoip fuzzy condition tee tarpit sysrq steal rawnat logmark ipmark dhcpmac delude chaos account"
Unset:  CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, INSTALL_MASK, LC_ALL, PORTAGE_BUNZIP2_COMMAND, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, PORTAGE_RSYNC_EXTRA_OPTS, SYNC, USE_PYTHON
kiwifb commented 9 years ago

Please revert to numpy-1.8.x the new package.keywords/sage only contains keywords for numpy 1.8.x for a reason. If numpy 1.9 is keyworded in the main tree we'll have to provide a package.mask for it.

pharpend commented 9 years ago

Yep, numpy 1.9 is in the ~amd64 tree. Here's the output of eix -n numpy:

* dev-libs/boost-numpy
     Available versions:  (~)0_pre20131206 **9999 {doc examples}
     Homepage:            https://github.com/ndarray/Boost.NumPy
     Description:         Boost.Python interface for NumPy

[I] dev-python/numpy
     Available versions:  1.8.0-r1 (~)1.8.1 (~)1.8.2 (~)1.9.0 (~)1.9.0-r1 (~)1.9.1 {doc lapack test PYTHON_TARGETS="python2_7 python3_3 python3_4"}
     Installed versions:  1.9.1(01:55:24 AM 11/28/2014)(lapack -doc -test PYTHON_TARGETS="python2_7 python3_3 -python3_4")
     Homepage:            http://numpy.scipy.org/
     Description:         Fast array and numerical python library

* dev-python/numpydoc
     Available versions:  0.4-r1 {test PYTHON_TARGETS="pypy python2_7 python3_3 python3_4"}
     Homepage:            https://pypi.python.org/pypi/numpydoc
     Description:         Sphinx extension to support docstrings in Numpy format

* dev-python/root_numpy
     Available versions:  (~)3.2.0 (~)3.3.0 (~)3.3.1 {examples test PYTHON_TARGETS="python2_7"}
     Homepage:            https://github.com/rootpy/root_numpy
     Description:         Interface between ROOT and numpy

Found 4 matches.
kiwifb commented 9 years ago

You have ~amd64 in your make.conf? Then you'll have to mask it manually until we can upgrade to matplotlib 1.4.

pharpend commented 9 years ago

I masked >=dev-python/numpy-1.9, but I'm now getting this error:

These are the packages that would be merged, in order:

Calculating dependencies  . ... done!
[ebuild  N     ] dev-python/matplotlib-1.3.1  USE="cairo gtk qt4 wxwidgets -doc -examples -excel -fltk -gtk3 -latex -pyside {-test} -tk" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB
[ebuild  N     ] dev-python/pandas-0.15.0  USE="-R -doc -examples -excel -html {-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB
[ebuild  N     ] dev-python/rpy-2.5.0-r1  USE="{-test}" PYTHON_TARGETS="python2_7 python3_3 -python3_4" 0 KiB
[ebuild  N     ] sci-mathematics/sage-6.4-r1::sage-on-gentoo  USE="-debug -latex -lrs -nauty -testsuite" PYTHON_TARGETS="python2_7" 0 KiB
[ebuild  N     ] sci-mathematics/sage-data-conway_polynomials-0.4-r2::sage-on-gentoo  0 KiB
[ebuild  N     ] sci-mathematics/sage-notebook-0.11.0::sage-on-gentoo  USE="java -server {-test}" PYTHON_TARGETS="python2_7" 0 KiB

Total: 6 packages (6 new), Size of downloads: 0 KiB
>>> Verifying ebuild manifests

>>> Jobs: 0 of 6 complete, 1 running                Load avg: 0.47, 0.56, 0.55
>>> Emerging (1 of 6) dev-python/matplotlib-1.3.1::gentoo
>>> Jobs: 0 of 6 complete, 1 running                Load avg: 0.47, 0.56, 0.55
>>> Failed to emerge dev-python/matplotlib-1.3.1, Log file:
>>> Jobs: 0 of 6 complete, 1 running                Load avg: 0.59, 0.58, 0.56
>>>  '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'
>>> Jobs: 0 of 6 complete, 1 running                Load avg: 0.59, 0.58, 0.56
>>> Jobs: 0 of 6 complete, 1 running, 1 failed      Load avg: 0.59, 0.58, 0.56
>>> Jobs: 0 of 6 complete, 1 failed                 Load avg: 0.59, 0.58, 0.56

 * Package:    dev-python/matplotlib-1.3.1
 * Repository: gentoo
 * Maintainer: python@gentoo.org
 * USE:        abi_x86_64 amd64 cairo elibc_glibc gtk kernel_linux python_targets_python2_7 python_targets_python3_3 qt4 userland_GNU wxwidgets
 * FEATURES:   distcc preserve-libs sandbox userpriv usersandbox
>>> Unpacking source...
>>> Unpacking matplotlib-1.3.1.tar.gz to /var/tmp/portage/dev-python/matplotlib-1.3.1/work
>>> Source unpacked in /var/tmp/portage/dev-python/matplotlib-1.3.1/work
>>> Preparing source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * Will copy sources from /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1
 * python3_3: copying to /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3
 * python2_7: copying to /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * python3_3: running distutils-r1_run_phase python_configure
 * python2_7: running distutils-r1_run_phase python_configure
 * python2_7: running distutils-r1_run_phase python_configure_all
>>> Source configured.
>>> Compiling source in /var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1 ...
 * python3_3: running distutils-r1_run_phase python_compile
 * python2_7: running distutils-r1_run_phase python_compile
 * Scanning for an open DISPLAY to start Xvfb ...
 * Scanning for an open DISPLAY to start Xvfb ...
 * Starting Xvfb on $DISPLAY=1 ...
 * Starting Xvfb on $DISPLAY=2 ...
/usr/bin/python3.3 setup.py build build --build-lib=/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3/build/build/lib
/usr/bin/python2.7 setup.py build build --build-lib=/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7/build/build/lib
Xlib:  extension "RANDR" missing on display ":2".
============================================================================
Edit setup.cfg to change the build options

BUILDING MATPLOTLIB
            matplotlib: yes [1.3.1]
                python: yes [3.3.5 (default, Nov 27 2014, 22:32:16)  [GCC
                        4.8.3]]
              platform: yes [linux]

REQUIRED DEPENDENCIES AND EXTENSIONS
                 numpy: yes [version 1.8.2]
              dateutil: yes [using dateutil version 2.2]
               tornado: yes [using tornado version 4.0.2]
             pyparsing: yes [using pyparsing version 2.0.3]
                 pycxx: yes [Official versions of PyCXX are not compatible
                        with Python 3.x.  Using local copy]
                libagg: yes [pkg-config information for 'libagg' could not
                        be found. Using local copy.]
              freetype: yes [version 17.2.11]
                   png: yes [version 1.6.13]

OPTIONAL SUBPACKAGES
           sample_data: yes [installing]
              toolkits: yes [installing]
                 tests: yes [nose 0.11.1 or later is required to run the
                        matplotlib test suite]

OPTIONAL BACKEND EXTENSIONS
                macosx: no  [Mac OS-X only]
                qt4agg: no  [PyQt4 not found]
               gtk3agg: no  [gtk3agg backend does not work on Python 3]
             gtk3cairo: no  [skipping due to configuration]
                gtkagg: no  [skipping due to configuration]
                 tkagg: no  [skipping due to configuration]
                 wxagg: no  [skipping due to configuration]
                   gtk: no  [skipping due to configuration]
                   agg: yes [installing]
                 cairo: yes [installing, version 1.10.0]
             windowing: no  [Microsoft Windows only]

OPTIONAL LATEX DEPENDENCIES
                dvipng: no
           ghostscript: yes [version 9.15]
                 latex: no
               pdftops: yes [version 0.28.0]

============================================================================
                        * The following required packages can not be built:
                        * qt4agg
 * esetup.py: WARNING: 
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
============================================================================
Edit setup.cfg to change the build options

BUILDING MATPLOTLIB
            matplotlib: yes [1.3.1]
                python: yes [2.7.8 (default, Nov 27 2014, 21:33:05)  [GCC
                        4.8.3]]
              platform: yes [linux2]

REQUIRED DEPENDENCIES AND EXTENSIONS
                 numpy: yes [version 1.8.2]
              dateutil: yes [using dateutil version 2.2]
               tornado: yes [using tornado version 4.0.2]
             pyparsing: yes [using pyparsing version 2.0.3]
                 pycxx: yes [Couldn't import.  Using local copy.]
                libagg: yes [pkg-config information for 'libagg' could not
                        be found. Using local copy.]
              freetype: yes [version 17.2.11]
                   png: yes [version 1.6.13]

OPTIONAL SUBPACKAGES
           sample_data: yes [installing]
              toolkits: yes [installing]
                 tests: yes [nose 0.11.1 or later is required to run the
                        matplotlib test suite]

OPTIONAL BACKEND EXTENSIONS
                macosx: no  [Mac OS-X only]
                qt4agg: no  [PyQt4 not found]
               gtk3agg: no  [skipping due to configuration]
             gtk3cairo: no  [skipping due to configuration]
                gtkagg: yes [installing, Gtk: 2.24.25 pygtk: 2.24.0]
                 tkagg: no  [skipping due to configuration]
                 wxagg: yes [installing, version 3.0.1.1]
                   gtk: yes [installing, Gtk: 2.24.25 pygtk: 2.24.0]
                   agg: yes [installing]
                 cairo: yes [installing, version 1.10.0]
             windowing: no  [Microsoft Windows only]

OPTIONAL LATEX DEPENDENCIES
                dvipng: no
           ghostscript: yes [version 9.15]
                 latex: no
               pdftops: yes [version 0.28.0]

============================================================================
                        * The following required packages can not be built:
                        * qt4agg
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
/usr/lib/portage/python3.3/isolated-functions.sh: line 195: wait: `virtualmake: the wrap_setup distutils-r1_python_compile failed.': not a pid or valid job spec
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
 * esetup.py: WARNING: 
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
/usr/lib/portage/python3.3/isolated-functions.sh: line 195: wait: `virtualmake: the wrap_setup distutils-r1_python_compile failed.': not a pid or valid job spec
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
/usr/lib/portage/python3.3/isolated-functions.sh: line 226: kill: (21243) - No such process
 * Messages for package dev-python/matplotlib-1.3.1:
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python3_3'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
 * ERROR: dev-python/matplotlib-1.3.1::gentoo failed (compile phase):
 *   virtualmake: the wrap_setup distutils-r1_python_compile failed.
 * 
 * Call stack:
 *     ebuild.sh, line   93:  Called src_compile
 *   environment, line 4134:  Called distutils-r1_src_compile
 *   environment, line 1378:  Called _distutils-r1_run_foreach_impl 'python_compile'
 *   environment, line  384:  Called python_parallel_foreach_impl 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 3890:  Called multibuild_parallel_foreach_variant '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2803:  Called multibuild_foreach_variant '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2746:  Called _multibuild_run '_multibuild_parallel' '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2744:  Called _multibuild_parallel '_python_multibuild_wrapper' 'distutils-r1_run_phase' 'python_compile'
 *   environment, line 2794:  Called _python_multibuild_wrapper 'distutils-r1_run_phase' 'python_compile'
 *   environment, line  867:  Called distutils-r1_run_phase 'python_compile'
 *   environment, line 1369:  Called python_compile
 *   environment, line 3241:  Called virtualmake
 *   environment, line 4840:  Called die
 * The specific snippet of code:
 *       [[ ${retval} -ne 0 ]] && die "${FUNCNAME}: the ${VIRTUALX_COMMAND} failed.";
 * 
 * If you need support, post the output of `emerge --info '=dev-python/matplotlib-1.3.1::gentoo'`,
 * the complete build log and the output of `emerge -pqv '=dev-python/matplotlib-1.3.1::gentoo'`.
 * The complete build log is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/build.log'.
 * The ebuild environment file is located at '/var/tmp/portage/dev-python/matplotlib-1.3.1/temp/environment'.
 * Working directory: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1-python2_7'
 * S: '/var/tmp/portage/dev-python/matplotlib-1.3.1/work/matplotlib-1.3.1'
kiwifb commented 9 years ago

OK, technically it is main tree issue but let's try something can you set USE="-qt4" for matplotlib and try again? I have a feeling the qt4 dependency is not correct.

kiwifb commented 9 years ago

Definitely something wrong with the qt4 useflag.

pharpend commented 9 years ago

Alright, I set USE="-qt4", and matplotlib compiles just fine. So, you're right, it's an issue with the qt4 useflag. I'll submit a bug.

pharpend commented 9 years ago

Apparently it already is a bug. https://bugs.gentoo.org/show_bug.cgi?id=530492 . They're fixing it for 1.4.2, so we might need to fix matplotlib, and then provide it in this overlay under a different package name.

pharpend commented 9 years ago

Could you maybe add a note in the README that USE="qt4" will not build?

kiwifb commented 9 years ago

This is limited to matplotlib. I can add a little something, somewhere.

kiwifb commented 9 years ago

So I added a note in the README for a limited time. The setting is clearly explained in package.use/sage and is limited to matplotlib 1.3*. If matplotlib stays in the main tree they should probably do a more general fix in /usr/portage/profile.