search

cschwan / sage-on-gentoo

(Unofficial) Gentoo Overlay for Sage- and Sage-related ebuilds
84 stars 26 forks source link

sci-mathematics/sage-doc-9.7 failed to build #722

Closed hackitforfun closed 1 year ago

hackitforfun commented 1 year ago

It has been some time since the said package failed to build with each system update. It seems that the problem is the following line in the log file, which is also attached.

[plotting ] TypeError: ufunc 'isfinite' not supported for the input types, and the inputs could not be safely coerced to any supported types according to the casting rule ''safe'' build.log

kiwifb commented 1 year ago

Right. What version of matplotlib and numpy do you have? Oh, I see indication of matplotlib 3.6, are you on ~amd64?

hackitforfun commented 1 year ago

Thanks for the fast response, my matplotlib version is 3.6.1, and yes, I am on ~amd64.

hackitforfun commented 1 year ago

Forgot to mention the numpy version is 1.23.4

kiwifb commented 1 year ago

There may be incompatibilities with matplotlib 3.6, I will check ASAP.

kiwifb commented 1 year ago

https://trac.sagemath.org/ticket/34668 has some stuff but I am not sure it is enough for what I see. I will check once I am at my desk.

kiwifb commented 1 year ago

OK, cannot quite try it. So, I am counting on you :) I have pushed sage-9.7-r2 which includes the bits to support matplotlib 3.6. So, update sage and then try sage-doc again. If it still fails, I may have to ask upstream as it will almost certainly affect their building of the doc as well.

kiwifb commented 1 year ago

Actually ran the tests I could and it still fails with the current sage 9.8 beta. Trying to figure out which bits is causing the breakage.

kiwifb commented 1 year ago

I think I got the guilty bits. Further testing to be done.

kiwifb commented 1 year ago

Should be fixed by 2b422a66279c390433ca79ae66c343a3b17c6910 which update 9.7 to r3. Sorry for the rebuilds. Following up the fix upstream at https://trac.sagemath.org/ticket/34693

hackitforfun commented 1 year ago

I just updated the system, and can now confirm that everything works beautifully. Thank you :)