cselenyi / solenabugs

Solena Bug Tracking
GNU Lesser General Public License v2.1
0 stars 0 forks source link

MRTM not working with new worker/Matlab/Solena #32

Open GinaGriffioen opened 1 year ago

GinaGriffioen commented 1 year ago

MRTM is not workning anymore in kinetic analysis block, where it previously did.

Here is the studylayout:

Block Kinetic Analyses Block 1 % Note: no reference region assumed! { PET { CONST $Medk2rCSOpet1 $Medk2rcerWMpet1 $Medk2rCSOpet2 $Medk2rcerWMpet2 $Medk2rCSOpet1_11F $Medk2rcerWMpet1_11F $Medk2rCSOpet2_11F $Medk2rcerWMpet2_11F merge_uncorr_blood_with_pf 1_anc.mat 1_parentfrac.txt 1_anc_processed.mat getweights_4_kinfit pet1_realigned_roistats.mat weights_1.txt RENORMROI WB ISOTOPE 18F dokinfit createstructure 1_kinfitresults.mat pet1_realigned_roistats.mat 1_anc_processed.mat weights_1.txt INJTIME FRAME1 dokinfit CM2T4K 1_kinfitresults.mat CSO .1 .05 .05 .05 RUNINDEX 1 dokinfit SRTM 1_kinfitresults.mat CSO 0.1 0.1 0.1 RUNINDEX 1 dokinfit MRTM 1_kinfitresults.mat CSO 10 RUNINDEX 1 dokinfit MRTM2 1_kinfitresults.mat CSO 10 K2R $Medk2rCSOpet1 RUNINDEX 1 dokinfit MRTM2 1_kinfitresults.mat CSO 10 K2R MRTM(3):ACC,INS,CAU,TC,PCC,FC RUNINDEX 5 } }

Error I get for dokinfit(MRTM,1_kinfitresults.mat,CSO,10;RUNINDEX 1 : (...) ROI nr: 85/98 L_SMC : 1.765 0.050 3.673 0.131 3 ROI nr: 86/98 R_SMC : 1.654 0.051 3.512 0.139 3 ROI nr: 87/98 SMC : 1.709 0.050 3.595 0.135 2 ROI nr: 88/98 L_SN : NaN NaN NaN NaN -1

Error executing command: PET:dokinfit, parameters: MRTM 1_kinfitresults.mat CSO 10 RUNINDEX 1
Error report: Subscripted assignment between dissimilar structures.

Error in kinfit_wrapMRTM (line 263)

Error in dokinfit (line 181)

And for dokinfit(MRTM2, kinfitresults.mat:CSO,10, K2R $Medk2rCSOpet1, RUNINDEX, 1): (..) ROI nr: 86/98 R_SMC : 2.240 0.038 3.571 3 ROI nr: 87/98 SMC : 2.275 0.038 3.654 2 ROI nr: 88/98 L_SN : NaN NaN NaN -1

Error executing command: PET:dokinfit, parameters: MRTM2 1_kinfitresults.mat CSO 10 K2R $Medk2rCSOpet1 RUNINDEX 1
Error report: Subscripted assignment between dissimilar structures.

Error in kinfit_wrapMRTM2 (line 276)

Error in dokinfit (line 181)

cselenyi commented 10 months ago

@GinaGriffioen this is fixed in the new worker variant, see #33