csglab / REMBRANDTS

REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability
GNU General Public License v3.0
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can't open the file "vsd_normalized.exonic.all.centered.mx.txt" #6

Open BoomSophie opened 2 years ago

BoomSophie commented 2 years ago

Hi,

I met some trouble when run this script. I have rewritten the code of DESeq.R as the script which you provided, but it seems not able to generate the correct result files. Could you please tell me the solution. Thanks!

Errors are as following:

Error in if (common.len == 1L) unlist(x, recursive = FALSE) else if (common.len > : argument is of length zero Calls: DESeqDataSetFromHTSeqCount ... DESeqDataSetFromMatrix -> DESeqDataSet -> sapply -> sapply -> simplify2array stay of execution