csiro-crop-informatics / repset

Reproducible evaluation of short read mappers
GNU General Public License v3.0
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Alternative read simulator? #47

Closed rsuchecki closed 4 years ago

rsuchecki commented 5 years ago

The following tool has been used e.g. for evaluation of SevenBridges graph genome pipeline and may be relevant for this or followup work if we were to include/evaluate variant calling

https://github.com/sbg/Mitty

https://www.nature.com/articles/s41588-018-0316-4