csw / bioruby-maf

MAF parser for BioRuby
MIT License
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Join blocks after filtering species #78

Closed csw closed 12 years ago

csw commented 12 years ago

Blankenberg et. al. section 2.4.2: "This requires the genomic positions of each species in the blocks-to-be-joined to have genomic positions that start and end directly adjacent to each other. When joining, the strand of each sequence is important, as positions listed in opposing orientations are considered different even if they are equivalent locations."

csw commented 12 years ago

Implemented.