Straighten out nomenclature for MAF operations

csw / bioruby-maf

MAF parser for BioRuby

MIT License

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Straighten out nomenclature for MAF operations #83

Closed csw closed 12 years ago

csw commented 12 years ago

Things are all over the place right now with stitching/slicing/tiling/etc. Need to sort this all out and follow the usage in [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3157923/](Blankenberg et al.)

csw commented 12 years ago

We're using "tiling" for what the paper calls "stitching", but their actual bx-python code calls it "tiling" too and I think the name makes more sense and differentiates it further from block joining. Can always alias #tile to #stitch.