Multiqc doesn't use all information from cellranger, only from cellranger count and vdj.
In order to have more informative multiqc report I am going to create a cellranger parser, that fetches information from the cellranger metrics_summary.csv and creates a table.
Can be closed when:
[x] Module for parsing cellranger metric_summary
[x] Added module to all workflows and properly tested
Multiqc doesn't use all information from cellranger, only from cellranger count and vdj. In order to have more informative multiqc report I am going to create a cellranger parser, that fetches information from the cellranger metrics_summary.csv and creates a table.
Can be closed when: