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ctlab / LinSeed

Linseed: LINear Subspace identification for gene Expresion Deconvolution
MIT License
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create a linseedObject from data matrix #6

Closed tdw1221 closed 5 years ago

tdw1221 commented 5 years ago

Hi, I was trying to create a linseedObject with a data matrix, however, the tutorial only provides way to create an object from GEO database. Is there a way i could make one myself?

Thanks daiwei

konsolerr commented 5 years ago

Hi daiwei,

you can certainly do that, please see #1 in short, you can just pass the matrix object instead of GEO identifier and after that you'll be able to follow the tutorial.

I will soon move from R6 classes to S4 classes and this will hopefully make documentation of methods/functions a bit easier and more transparent.

Cheers, Kostya

tdw1221 commented 5 years ago

Thank you Kostya!