ctlab / fgsea

Fast Gene Set Enrichment Analysis
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Adding fold enrichment score to fora() output #156

Closed markziemann closed 4 months ago

markziemann commented 4 months ago

Fold enrichment score is a useful surrogate for effect size. Both padj and fold enrichment score should be used when prioritising pathway enrichment results. I have included foldEnrichment in the fora() ouput.

assaron commented 4 months ago

@markziemann indeed, I don't know why we didn't have it before. Thanks for the PR!