Error when reading block data

ctlab / parallel-rearrangements

parallel rearrangements caller

MIT License

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Error when reading block data #2

Closed alexmorphine closed 3 years ago

alexmorphine commented 3 years ago

Hi, I have an error reading block data that is taken from SibeliaZ output It actually looks pretty identical to the example you have.

The log is attached: output.txt

I am using Windows 10 and Python 3.6.7 (I will try to run it with newer Python today)

oxygen311 commented 3 years ago

This bug is presented only at Windows machine. So as a hot fix you can try to use UNIX based system or send me full input and I will run tool (provide Newick tree).

I will try to find windows machine and reproduce this bug to fix it.

alexmorphine commented 3 years ago

Added tree to Google drive folder :)

oxygen311 commented 3 years ago

This bug is fixed! Install the new version:

pip install PaReBrick==0.1.22

If you have other questions, you can write me in telegram @what_a_name