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ctmrbio
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claritylims
Customizations for our GenoLogics BaseSpace Clarity LIMS
MIT License
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Update SQL command for prod02
#235
boulund
closed
4 years ago
0
covid-19: Fix SQL for data export
#234
boulund
closed
4 years ago
1
covid-19: Replace all occurences of "KNM"/"knm" in covid workflow code with "direkttest" or "dt"
#233
boulund
opened
4 years ago
0
Cov 230 datagraphics append frozen stats
#232
boulund
closed
4 years ago
1
Add --append-frozen-stats
#231
boulund
closed
4 years ago
1
covid-19: Make it possible to append stats from prod01 to prod02 datagraphics submissions
#230
boulund
closed
4 years ago
1
Update SQL export script with new project IDs
#229
boulund
closed
4 years ago
0
Update SQL export script with new project IDs
#228
boulund
closed
4 years ago
0
covid-19: Update table IDs for datagraphics export SQL statement on stage02 prod02
#227
boulund
closed
4 years ago
1
Cov 222 vasterbotten rid
#226
boulund
closed
4 years ago
0
Remove ABI 7500, change QS7 to QS5
#225
boulund
closed
4 years ago
0
Remove ABI 7500 from list of qPCR instruments
#224
MaeSei
closed
4 years ago
1
Add support for Region Västerbotten RID barcodes
#223
boulund
closed
4 years ago
0
covid-19: Add support for Region Västerbotten RIDs
#222
boulund
closed
4 years ago
0
Prod
#221
boulund
closed
4 years ago
0
covid-19: Internal testing makes requests to Direkttest when it should not
#220
boulund
closed
4 years ago
1
change args attribute access to dict key
#219
boulund
closed
4 years ago
0
Fix try except
#218
boulund
closed
4 years ago
0
Add --set-to-negative
#217
boulund
closed
4 years ago
0
covid-19: Validate deployment on prod02
#216
boulund
closed
4 years ago
1
covid-19: Make it possible to correct results in datagraphics parser sccript
#215
boulund
closed
4 years ago
1
Adjust for Clarity 5.2 controls being booleans in database
#214
boulund
closed
4 years ago
0
covid-19: validate deployment on stage02
#213
boulund
closed
4 years ago
0
covid-19: Adjust code to work on new Clarity 5.2 server
#212
boulund
closed
4 years ago
1
LIMS Automation to reboot server
#211
MaeSei
closed
4 years ago
1
covid-19: Make "report to SmiNet successful" mandatory to leave step report to SmiNet
#210
MaeSei
opened
4 years ago
2
covid-19: Parse Results required to finish RT-PCR step
#209
MaeSei
opened
4 years ago
0
New shell script and sql statement intended to substitude get-all-sam…
#208
chichackles
closed
4 years ago
1
Cov 205 tweak datagraphics parser
#207
boulund
closed
4 years ago
0
Cov 205 tweak datagraphics parser
#206
boulund
closed
4 years ago
0
covid-19: Data exports are not working
#205
boulund
closed
4 years ago
3
covid-19: Uninformative error when creating biobank plate with malformed biobank plate file
#204
boulund
opened
4 years ago
0
Cov 198 do not set result to positive if internal control is zero
#203
boulund
closed
4 years ago
0
Do not report samples as positive if human beta actin is zero
#202
boulund
closed
4 years ago
0
Add rtpcr analysis test scenario 10, fail a sample on too low hex
#201
boulund
closed
4 years ago
0
Cov 195 negative controls should not be ignored
#200
boulund
closed
4 years ago
0
Cov 198 do not set result to positive if internal control is zero
#199
boulund
closed
4 years ago
0
covid-19: Don't set result to positive if internal control is zero
#198
boulund
closed
4 years ago
1
Ignore errors in negative controls
#197
boulund
closed
4 years ago
0
covid-19: Add support for Consent endpoint in KNM client
#196
boulund
closed
4 years ago
2
covid-19: Negative controls should be ignored
#195
boulund
closed
4 years ago
2
Encode referring clinic name as ascii, removing strange chars
#194
boulund
closed
4 years ago
0
Increase barcode size and optimize position for easier scanning in Tecan robot
#193
boulund
closed
4 years ago
1
Dev
#192
boulund
closed
4 years ago
0
Remove county info, was not required!
#191
boulund
closed
4 years ago
0
Change how SmiNet county code is retrieved from Direkttest
#190
boulund
closed
4 years ago
1
covid-19: Direkttest changes their SmiNet alias location
#189
boulund
closed
4 years ago
3
covid-19: Tecan robot sometimes creates an extra column in output file
#188
boulund
opened
4 years ago
1
Remove double underscores if no referring data is available
#187
boulund
closed
4 years ago
0
Catch AttributeError for samples not from KNM
#186
boulund
closed
4 years ago
0
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