KrakenUniq not working with Singularity

ctmrbio / stag-mwc

StaG Metagenomic Workflow Collaboration

https://stag-mwc.readthedocs.org

MIT License

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KrakenUniq not working with Singularity #198

Closed boulund closed 1 year ago

boulund commented 1 year ago

Due to an upstream issue with KrakenUniq it currently doesn't work with Singularity. If you want to run KrakenUniq I suggest you run with --use-conda until this is resolved.

boulund commented 1 year ago

Fixed in v0.6.0!