Use `slow_odgi`'s `paths` subcommand consistently

cucapra / pollen

generating hardware accelerators for pangenomic graph queries

MIT License

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Use `slow_odgi`'s `paths` subcommand consistently #109

Closed anshumanmohan closed 12 months ago

anshumanmohan commented 12 months ago

Until this PR I was using python -m slow_odgi.paths in some cases and the actual subcommand slow_odgi paths in some. There was some reasoning behind this, and that is chalked out here, but it's time to move on and make these uses of the command consistent.