cucapra / pollen

generating hardware accelerators for pangenomic graph queries
MIT License
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Use turnt return_code for cleanup #47

Closed anshumanmohan closed 1 year ago

anshumanmohan commented 1 year ago

A tiny bit of cleanup in validate. The command produces its interesting output in stderr, so, in my Turnt command, I was trying to use 2>&1 to pipe the stderr into stdout and then let Turnt carry that on to the output file.

Turns out I missed a detail: I needed to tell Turnt to expect a non-zero return code. This also closes https://github.com/cucapra/turnt/issues/25; sorry to have made a false accusation!

sampsyo commented 1 year ago

Wahoo!