Overlaps receive shoddy treatment right now; I just replace them with *. A more thoughtful treatment would actually print it out during emit. This will likely expose various instances where odgi algorithms do something reasonable with overlaps and we just punt.
Overlaps receive shoddy treatment right now; I just replace them with
*. A more thoughtful treatment would actually print it out duringemit. This will likely expose various instances where odgi algorithms do something reasonable with overlaps and we just punt.