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cultivarium / MicrobeMod

A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing
MIT License
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Permissions on s3 example files? #12

Closed JamesRH closed 7 months ago

JamesRH commented 7 months ago

All 3 AWS CLI S3 commands in the readme result in an error for me:

aws  s3 cp --recursive s3://cultivarium-sequencing/MICROBEMOD-DATA-NOV2023/pod5/ .
fatal error: An error occurred (AccessDenied) when calling the ListObjectsV2 operation: Access Denied

The flags --no-sign-request --no-verify-ssl and --request-payer=requester did not change the error.

Other public buckets retrieved without issue for me on the same system. Are these not public or not set up for "requester pays"?

Environment (Ubuntu-like w/ latest aws cli apt-geted):

 aws --version
aws-cli/1.22.34 Python/3.10.12 Linux/6.5.6-76060506-generic botocore/1.23.34

cat /etc/os-release
NAME="Pop!_OS"
VERSION="22.04 LTS"
ID=pop
ID_LIKE="ubuntu debian"
PRETTY_NAME="Pop!_OS 22.04 LTS"
VERSION_ID="22.04"
UBUNTU_CODENAME=jammy
alexcritschristoph commented 7 months ago

Sorry about that, will address tomorrow.

alexcritschristoph commented 7 months ago

Hi, this should be fixed now, are you able to access?

JamesRH commented 7 months ago

Yes, thank you, that makes testing easier.