search

cultivarium / MicrobeMod

A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing
MIT License
34 stars 1 forks source link

Step 2 requires SamTools>=1.11? #9

Closed aforestsomewhere closed 6 months ago

aforestsomewhere commented 8 months ago

Hello,

Small suggestion to update the docs to specify that Samtools v1.11 or later is required in Step 2 to cope with the MM flags during mapping (https://github.com/samtools/htslib/issues/1418).

alexcritschristoph commented 6 months ago

Fixed in https://github.com/cultivarium/MicrobeMod/pull/14