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curso-r / rightgbm

Easier way for installing LightGBM for R
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package or namespace load failed for ‘lightgbm’ #1

Open jbkunst opened 4 years ago

jbkunst commented 4 years ago

Hi! Thanks for this package.

In windows 10 I have an error when I try library(lightgbm). See the reprex for more detail.

Do you have some ideas to solve and install lightgbm?

Thanks in advance.


# devtools::install_github("curso-r/rightgbm")

library(rightgbm)

install_lightgbm()
#> Installing package into 'C:/Users/Joshua/Documents/R/win-library/3.6'
#> (as 'lib' is unspecified)
#> package 'lightgbm' successfully unpacked and MD5 sums checked

library(lightgbm)
#> Loading required package: R6
#> Error: package or namespace load failed for 'lightgbm' in inDL(x, as.logical(local), as.logical(now), ...):
#>  unable to load shared object 'C:/Users/Joshua/Documents/R/win-library/3.6/lightgbm/libs/x64/lib_lightgbm.dll':
#>   LoadLibrary failure:  No se puede encontrar el módulo especificado.

sessioninfo::session_info()
#> - Session info ---------------------------------------------------------------
#>  setting  value                       
#>  version  R version 3.6.3 (2020-02-29)
#>  os       Windows 10 x64              
#>  system   x86_64, mingw32             
#>  ui       RTerm                       
#>  language (EN)                        
#>  collate  Spanish_Latin America.1252  
#>  ctype    Spanish_Latin America.1252  
#>  tz       America/Santiago            
#>  date     2020-07-31                  
#> 
#> - Packages -------------------------------------------------------------------
#>  package     * version    date       lib source                           
#>  assertthat    0.2.1      2019-03-21 [1] CRAN (R 3.6.3)                   
#>  cli           2.0.2      2020-02-28 [1] CRAN (R 3.6.3)                   
#>  crayon        1.3.4.9000 2020-07-24 [1] Github (r-lib/crayon@dcf6d44)    
#>  curl          4.3        2019-12-02 [1] CRAN (R 3.6.3)                   
#>  data.table    1.13.0     2020-07-24 [1] CRAN (R 3.6.3)                   
#>  digest        0.6.25     2020-02-23 [1] CRAN (R 3.6.3)                   
#>  evaluate      0.14       2019-05-28 [1] CRAN (R 3.6.3)                   
#>  fansi         0.4.1      2020-01-08 [1] CRAN (R 3.6.3)                   
#>  glue          1.4.1      2020-05-13 [1] CRAN (R 3.6.3)                   
#>  highr         0.8        2019-03-20 [1] CRAN (R 3.6.3)                   
#>  htmltools     0.5.0      2020-06-16 [1] CRAN (R 3.6.3)                   
#>  httr          1.4.2      2020-07-20 [1] CRAN (R 3.6.3)                   
#>  jsonlite      1.7.0      2020-06-25 [1] CRAN (R 3.6.3)                   
#>  knitr         1.29       2020-06-23 [1] CRAN (R 3.6.3)                   
#>  lattice       0.20-41    2020-04-02 [1] CRAN (R 3.6.3)                   
#>  magrittr      1.5        2014-11-22 [1] CRAN (R 3.6.3)                   
#>  Matrix        1.2-18     2019-11-27 [2] CRAN (R 3.6.3)                   
#>  R6          * 2.4.1      2019-11-12 [1] CRAN (R 3.6.3)                   
#>  rightgbm    * 0.1.2      2020-07-31 [1] Github (curso-r/rightgbm@915d9ac)
#>  rlang         0.4.7      2020-07-09 [1] CRAN (R 3.6.3)                   
#>  rmarkdown     2.3        2020-06-18 [1] CRAN (R 3.6.3)                   
#>  sessioninfo   1.1.1      2018-11-05 [1] CRAN (R 3.6.3)                   
#>  stringi       1.4.6      2020-02-17 [1] CRAN (R 3.6.2)                   
#>  stringr       1.4.0      2019-02-10 [1] CRAN (R 3.6.3)                   
#>  withr         2.2.0      2020-04-20 [1] CRAN (R 3.6.3)                   
#>  xfun          0.15       2020-06-21 [1] CRAN (R 3.6.3)                   
#>  yaml          2.2.1      2020-02-01 [1] CRAN (R 3.6.2)                   
#> 
#> [1] C:/Users/Joshua/Documents/R/win-library/3.6
#> [2] C:/Program Files/R/R-3.6.3/library

Created on 2020-07-31 by the reprex package (v0.3.0)

Athospd commented 4 years ago

Hey @jbkunst , I couldn't reproduce your error. Just a hunch: maybe rtools related issue?

library(rightgbm)
install_lightgbm()
#> Installing package into 'D:/OneDrive/Documents/R/win-library/3.6'
#> (as 'lib' is unspecified)
#> package 'lightgbm' successfully unpacked and MD5 sums checked
#> Warning: cannot remove prior installation of package 'lightgbm'
#> Warning in file.copy(savedcopy, lib, recursive = TRUE): problem copying D:
#> \OneDrive\Documents\R\win-library\3.6\00LOCK\lightgbm\libs\x64\lib_lightgbm.dll
#> to D:\OneDrive\Documents\R\win-library\3.6\lightgbm\libs\x64\lib_lightgbm.dll:
#> Permission denied
#> Warning: restored 'lightgbm'
library(lightgbm)
#> Carregando pacotes exigidos: R6
sessioninfo::session_info()
#> - Session info ---------------------------------------------------------------
#>  setting  value                       
#>  version  R version 3.6.3 (2020-02-29)
#>  os       Windows 10 x64              
#>  system   x86_64, mingw32             
#>  ui       RTerm                       
#>  language (EN)                        
#>  collate  Portuguese_Brazil.1252      
#>  ctype    Portuguese_Brazil.1252      
#>  tz       America/Sao_Paulo           
#>  date     2020-08-01                  
#> 
#> - Packages -------------------------------------------------------------------
#>  ! package     * version date       lib source                           
#>    assertthat    0.2.1   2019-03-21 [1] CRAN (R 3.6.1)                   
#>    cli           2.0.2   2020-02-28 [1] CRAN (R 3.6.3)                   
#>    crayon        1.3.4   2017-09-16 [1] CRAN (R 3.6.1)                   
#>    curl          4.3     2019-12-02 [1] CRAN (R 3.6.3)                   
#>    data.table    1.12.8  2019-12-09 [1] CRAN (R 3.6.3)                   
#>    digest        0.6.25  2020-02-23 [1] CRAN (R 3.6.3)                   
#>    evaluate      0.14    2019-05-28 [1] CRAN (R 3.6.1)                   
#>    fansi         0.4.1   2020-01-08 [1] CRAN (R 3.6.2)                   
#>    glue          1.4.1   2020-05-13 [1] CRAN (R 3.6.3)                   
#>    highr         0.8     2019-03-20 [1] CRAN (R 3.6.1)                   
#>    htmltools     0.4.0   2019-10-04 [1] CRAN (R 3.6.2)                   
#>    httr          1.4.1   2019-08-05 [1] CRAN (R 3.6.3)                   
#>    jsonlite      1.7.0   2020-06-25 [1] CRAN (R 3.6.3)                   
#>    knitr         1.29    2020-06-23 [1] CRAN (R 3.6.3)                   
#>  D lattice       0.20-38 2018-11-04 [1] CRAN (R 3.6.1)                   
#>    lightgbm    * 2.3.2   2020-08-01 [1] local                            
#>    magrittr      1.5     2014-11-22 [1] CRAN (R 3.6.1)                   
#>  D Matrix        1.2-17  2019-03-22 [1] CRAN (R 3.6.1)                   
#>    R6          * 2.4.1   2019-11-12 [1] CRAN (R 3.6.2)                   
#>    Rcpp          1.0.5   2020-07-06 [1] CRAN (R 3.6.3)                   
#>    rightgbm    * 0.1.2   2020-07-11 [1] Github (curso-r/rightgbm@915d9ac)
#>    rlang         0.4.6   2020-05-02 [1] CRAN (R 3.6.3)                   
#>    rmarkdown     2.3     2020-06-18 [1] CRAN (R 3.6.3)                   
#>    sessioninfo   1.1.1   2018-11-05 [1] CRAN (R 3.6.1)                   
#>    stringi       1.4.6   2020-02-17 [1] CRAN (R 3.6.2)                   
#>    stringr       1.4.0   2019-02-10 [1] CRAN (R 3.6.1)                   
#>    withr         2.2.0   2020-04-20 [1] CRAN (R 3.6.3)                   
#>    xfun          0.15    2020-06-21 [1] CRAN (R 3.6.3)                   
#>    yaml          2.2.1   2020-02-01 [1] CRAN (R 3.6.3)                   
#> 
#> [1] D:/OneDrive/Documents/R/win-library/3.6
#> [2] C:/Program Files/R/R-3.6.3/library
#> 
#>  D -- DLL MD5 mismatch, broken installation.

Created on 2020-08-01 by the reprex package (v0.3.0)

alainaa commented 4 years ago

Hello there!

I'm facing exactly the same issue. Don't think it has to do with my installed Rtools as I can install any package without any problem... Could you find a way to fix this? Thank you very much in advance!

library(rightgbm) install_lightgbm() Installing packages into ‘C:/Users/esabbaa0/Documents/R/win-library/3.6’ (as ‘lib’ is unspecified) probando la URL 'https://github.com/curso-r/lightgbm-build/releases/download/windows-r-3.6/lightgbm_2.3.2.zip' Content type 'application/octet-stream' length 1180979 bytes (1.1 MB) downloaded 1.1 MB probando la URL 'https://github.com/curso-r/lightgbm-build/releases/download/windows-r-3.6/lightgbm_3.0.0-1.zip' Content type 'application/octet-stream' length 1185838 bytes (1.1 MB) downloaded 1.1 MB probando la URL 'https://github.com/curso-r/lightgbm-build/releases/download/windows-r-3.6/lightgbm_3.0.0.zip' Content type 'application/octet-stream' length 1197344 bytes (1.1 MB) downloaded 1.1 MB package ‘lightgbm’ successfully unpacked and MD5 sums checked package ‘lightgbm’ successfully unpacked and MD5 sums checked package ‘lightgbm’ successfully unpacked and MD5 sums checked library(lightgbm) Error: package or namespace load failed for ‘lightgbm’ in inDL(x, as.logical(local), as.logical(now), ...): unable to load shared object 'C:/Users/esabbaa0/Documents/R/win-library/3.6/lightgbm/libs/x64/lib_lightgbm.dll': LoadLibrary failure: No se puede encontrar el módulo especificado. Además: Warning message: package ‘lightgbm’ was built under R version 3.6.3

_NB: just to confirm that 'C:/Users/esabbaa0/Documents/R/win-library/3.6/lightgbm/libs/x64/liblightgbm.dll' is really there: 1.821Kb...