With new version there are following relevant changes:
Add time stamps to log -stdout_timestamp "yyyy.MM.dd HHmm:"
Update conservation file name to {basename}{chain}.(.*).hom(.gz|.zst|.bz2|{})
where {basename} is one of
{basename}.pdb{basename}.pdb.gz{basename}.ent{basename}.ent.gz{basename}.cif{basename}.cif.gz
With new version there are following relevant changes:
-stdout_timestamp "yyyy.MM.dd HHmm:"
{basename}{chain}.(.*).hom(.gz|.zst|.bz2|{})
where{basename}
is one of{basename}.pdb
{basename}.pdb.gz
{basename}.ent
{basename}.ent.gz
{basename}.cif
{basename}.cif.gz