sarlinpe
commented
3 years ago runipy is depreacted and unmaintained. The preferred way of running notebooks from the command line is now nbconvert with the --execute flag: https://nbconvert.readthedocs.io/en/latest/execute_api.html
Dear author, I'm sorry to disturb you in my busy schedule. It's my runipy pipeline_ The following error occurred in aachen.ipynb. I don't know what to do. I want to ask you and look forward to your reply.[runipy pipeline_Aachen.ipynb **runipy pipeline_Aachen.ipynb 08/23/2021 05:15:29 PM INFO: Reading notebook pipeline_Aachen.ipynb 08/23/2021 05:15:30 PM INFO: Running cell: %load_ext autoreload %autoreload 2
from pathlib import Path from pprint import pformat
from hloc import extract_features, match_features, pairs_from_covisibility from hloc import colmap_from_nvm, triangulation, localize_sfm, visualization
08/23/2021 05:15:31 PM INFO: Cell returned 08/23/2021 05:15:31 PM INFO: Running cell: dataset = Path('datasets/aachen/') # change this if your dataset is somewhere else images = dataset / 'images/images_upright/'
pairs = Path('pairs/aachen/') sfm_pairs = pairs / 'pairs-db-covis20.txt' # top 20 most covisible in SIFT model loc_pairs = pairs / 'pairs-query-netvlad50.txt' # top 50 retrieved by NetVLAD
outputs = Path('outputs/aachen/') # where everything will be saved reference_sfm = outputs / 'sfm_superpoint+superglue' # the SfM model we will build results = outputs / 'Aachen_hloc_superpoint+superglue_netvlad50.txt' # the result file
08/23/2021 05:15:31 PM INFO: Cell returned 08/23/2021 05:15:31 PM INFO: Running cell:
list the standard configurations available
print(f'Configs for feature extractors:\n{pformat(extract_features.confs)}') print(f'Configs for feature matchers:\n{pformat(match_features.confs)}')
08/23/2021 05:15:31 PM INFO: Cell returned 08/23/2021 05:15:31 PM INFO: Running cell:
pick one of the configurations for extraction and matching
you can also simply write your own here!
feature_conf = extract_features.confs['superpoint_aachen'] matcher_conf = match_features.confs['superglue']
08/23/2021 05:15:31 PM INFO: Cell returned 08/23/2021 05:15:31 PM INFO: Running cell: feature_path = extract_features.main(feature_conf, images, outputs)
08/23/2021 05:15:34 PM INFO: Cell returned 08/23/2021 05:15:34 PM INFO: Running cell: colmap_from_nvm.main( dataset / '3D-models/aachen_cvpr2018_db.nvm', dataset / '3D-models/database_intrinsics.txt', dataset / 'aachen.db', outputs / 'sfm_sift')
pairs_from_covisibility.main( outputs / 'sfm_sift', sfm_pairs, num_matched=20)
08/23/2021 05:18:52 PM INFO: Cell returned 08/23/2021 05:18:52 PM INFO: Running cell: sfm_match_path = match_features.main(matcher_conf, sfm_pairs, feature_conf['output'], outputs)
08/23/2021 10:09:49 PM INFO: Cell returned Traceback (most recent call last): File "/home/hzh005/.local/bin/runipy", line 8, in
sys.exit(main())
File "/home/hzh005/.local/lib/python3.8/site-packages/runipy/main.py", line 158, in main
nb_runner.run_notebook(skip_exceptions=args.skip_exceptions)
File "/home/hzh005/.local/lib/python3.8/site-packages/runipy/notebook_runner.py", line 232, in run_notebook
self.run_cell(cell)
File "/home/hzh005/.local/lib/python3.8/site-packages/runipy/notebook_runner.py", line 151, in run_cell
msg = self.kc.get_iopub_msg(timeout=1)
File "/home/hzh005/.local/lib/python3.8/site-packages/jupyter_client/utils.py", line 25, in wrapped
return loop.run_until_complete(coro(*args, *kwargs))
File "/home/hzh005/.local/lib/python3.8/site-packages/nest_asyncio.py", line 70, in run_until_complete
return f.result()
File "/usr/lib/python3.8/asyncio/futures.py", line 178, in result
raise self._exception
File "/usr/lib/python3.8/asyncio/tasks.py", line 280, in __step
result = coro.send(None)
File "/home/hzh005/.local/lib/python3.8/site-packages/jupyter_client/client.py", line 125, in _async_get_iopub_msg
return await self.iopub_channel.get_msg(args, kwargs)
File "/home/hzh005/.local/lib/python3.8/site-packages/jupyter_client/channels.py", line 230, in get_msg
raise Empty
_queue.Empty