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cvigilv
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ResidueFisher
Bioinformatics protocol that aims at mining information at the sequence and structure level of protein chain to detect possible evolutionary conserved residues.
MIT License
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feat: create PyMOL session with b-factor equal to number of times a residue is fished
#25
cvigilv
opened
1 year ago
0
chore: update foldseek to latest
#24
cvigilv
opened
1 year ago
0
chore: rename project
#23
cvigilv
closed
1 year ago
1
chore: update authors
#22
cvigilv
closed
1 year ago
0
fix: include 3di conserved residues when "fishing"
#21
cvigilv
closed
1 year ago
0
chore: validate protocol for detection of residue groups of interest
#20
cvigilv
opened
1 year ago
0
chore: move to trunk-based development
#19
cvigilv
opened
1 year ago
0
feat: Create final plot with all information for ease of analysis
#18
cvigilv
opened
1 year ago
0
feat: add more residue dictionaries
#17
cvigilv
opened
1 year ago
0
feat: change from MSA to DBSCAN for representative selection of Foldseek hits
#16
cvigilv
opened
1 year ago
0
feat: improve visualization of MSA imprinted PyMOL sessions
#15
cvigilv
closed
1 year ago
1
fix: correct wording over whole project
#14
cvigilv
closed
1 year ago
1
refactor: streamline imprinted moma pymol session creation
#13
cvigilv
closed
1 year ago
0
feat: add clustering Silhouette score grid-search plot
#12
cvigilv
opened
1 year ago
1
feat: add MOMA2 analysis plot
#11
cvigilv
closed
1 year ago
0
feat: add foldseek analysis plot
#10
cvigilv
closed
1 year ago
0
docs: add tutorial
#9
cvigilv
opened
1 year ago
1
chore: this is a test
#8
cvigilv
closed
1 year ago
0
feat: wait for MOMA to finish alignment and imprint
#7
cvigilv
closed
1 year ago
1
fix: tmux not quitting after MOMA alignment
#6
cvigilv
closed
1 year ago
1
Test issues
#5
cvigilv
closed
1 year ago
0
Add graphical abstract to repo
#4
cvigilv
closed
1 year ago
0
Conservation visualization on PyMOL session
#3
cvigilv
closed
1 year ago
0
Information imprinting for MOMA alignments
#2
cvigilv
closed
1 year ago
1
Imprinting information to query structure
#1
cvigilv
closed
1 year ago
0