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cwhidden / sprspace

A collection of shell and perl scripts for quantifying MCMC exploration of subtree prune-and-regraft tree space in MrBayes posteriors.
GNU General Public License v3.0
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Potential issue with mean_acces_time.pl #2

Open meyerx opened 5 years ago

meyerx commented 5 years ago

At line 177 and 210 of mean_access_time.pl the variable _startavg is set to 0

$info{$j}{$i}{start_avg} = 0;

However the variable employed for the computation of the MAT and MCT is called _meanstart (e.g. line 171 and 185). Is that the remnant of an old variable or should the variable _meanstart be set to 0 instead of _startavg ?

It doesn't seem to affect the results therefore I guess it's an old variable.