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cytodata / awesome-cytodata

A curated list of awesome cytodata resources
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Add list of batch correction methods from all related profiling modalities #10

Open shntnu opened 3 years ago

shntnu commented 3 years ago

Let's use this issue to collect a list of batch correction methods from both, image-based profiling, as well as related profiling modalities.

shntnu commented 3 years ago
  1. Weinberger E, & Lee S-I. (2021). Transferable representations of single-cell transcriptomic data (p. 2021.04.13.439707). doi: 10.1101/2021.04.13.439707. https://twitter.com/efweinberger/status/1383094623241838593.
  2. Tran HTN, Ang KS, Chevrier M, Zhang X, Lee NYS, Goh M, & Chen J. (2020). A benchmark of batch-effect correction methods for single-cell RNA sequencing data. Genome Biol., 21(1), 12. doi: 10.1186/s13059-019-1850-9. https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1850-9