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cytomining / CytoTable

Transform CellProfiler and DeepProfiler data for processing image-based profiling readouts with Pycytominer and other Cytomining tools.
https://cytomining.github.io/CytoTable/
BSD 3-Clause "New" or "Revised" License
7 stars 5 forks source link

Add timeout for large directory parsing in source processing #209

Open d33bs opened 3 months ago

d33bs commented 3 months ago

When sending large directory paths to CytoTable, it could take time to process these which manifests without warning. These could be directories which are submitted in error, meaning returning a warning could be helpful for the user to understand better that they may need to double check their source path.