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cytomining
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cytominer-database
A package for storing morphological profiling data.
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Create CITATION.cff
#133
bethac07
closed
2 years ago
1
Add citation file
#132
bethac07
closed
2 years ago
0
Make only a single database connection and close it when you're done with it.
#131
bethac07
opened
3 years ago
1
Cleanup and additional tests
#130
diskontinuum
opened
3 years ago
1
Add value-based tests for table ingestion
#129
diskontinuum
opened
3 years ago
4
Add tests for ingestion of files with missing columns
#128
diskontinuum
opened
3 years ago
2
Integrate the use of a reference schema for the '--sqlite' option (done for `--parquet`)
#127
diskontinuum
opened
3 years ago
1
Cleanup
#126
diskontinuum
closed
3 years ago
1
Cytominer learning
#125
ManonFepi
opened
4 years ago
1
Other ways of creating db backends or obviating the need for a db
#124
shntnu
opened
4 years ago
7
Explicitly test for nan being handled correctly
#123
shntnu
opened
4 years ago
1
Parquet_integration
#122
diskontinuum
closed
3 years ago
4
Convert schemata
#121
diskontinuum
closed
4 years ago
0
Add back author copyright
#120
gwaybio
closed
4 years ago
1
Add Author Tag to setup.cfg
#119
gwaybio
closed
4 years ago
0
Setting version for automatically updating documentation
#118
gwaybio
closed
4 years ago
3
Fix readthedocs instructions and setup
#117
shntnu
closed
4 years ago
9
Prep for new release 0.3.3
#116
shntnu
closed
4 years ago
1
Fix ingesting bug that creates one file per table
#115
shntnu
closed
4 years ago
1
Ingest creates multiple SQLite files, one per compartment
#114
shntnu
closed
4 years ago
0
Update Release wiki
#113
shntnu
closed
5 years ago
1
License file in MANIFEST.in
#112
gwaybio
opened
5 years ago
2
Prep for new release
#111
gwaybio
closed
5 years ago
1
Updating Maintainers
#110
gwaybio
closed
5 years ago
0
Windows Build Failing
#109
gwaybio
closed
5 years ago
2
Remove odo, networkx, and fix pytest fixtures
#108
gwaybio
closed
5 years ago
10
Build failing because of deprecation
#107
shntnu
closed
5 years ago
4
Create 32-bit int identifier for CPA compatibility
#106
shntnu
closed
5 years ago
5
Gemnasium is closed
#105
shntnu
closed
6 years ago
0
Address SQLite handling of na
#104
shntnu
closed
5 years ago
11
Ingest fails for certain (older?) versions of sqlite
#103
bethac07
closed
5 years ago
2
Document code and cleanup
#102
shntnu
closed
6 years ago
1
Document code and cleanup
#101
shntnu
closed
6 years ago
1
Ingest fails when columns don't align across sets
#100
shntnu
opened
6 years ago
3
Force identifier to be integer for CPA compatibility
#99
shntnu
closed
6 years ago
1
release 0.2.0
#98
cells2numbers
closed
6 years ago
0
Release 0.2.0
#97
mcquin
closed
6 years ago
0
Handle very large datasets (>100M single cells)
#96
shntnu
opened
6 years ago
2
Use directory path to form subdirectory paths.
#95
mcquin
closed
6 years ago
1
Handle missing columns
#94
bethac07
closed
6 years ago
2
Ingest fails when the files are not on the same drive
#93
bethac07
closed
6 years ago
0
Ingest data even if only image CSVs are present
#92
mcquin
closed
6 years ago
2
Don't ingest objects when cell count = 0
#91
shntnu
opened
6 years ago
2
Release 0.1.0
#90
mcquin
closed
6 years ago
0
Allow use of cytominer-database on just Image CSVs
#89
bethac07
closed
6 years ago
0
Allow searching for CSVs at arbitrary depths
#88
bethac07
opened
6 years ago
0
Add option to skip image header
#87
shntnu
closed
6 years ago
0
Optionally skip Image_ prefix
#86
shntnu
closed
6 years ago
1
Release 0.0.1
#85
mcquin
closed
6 years ago
0
Suppress DeprecationWarning from dependency of dependency.
#84
mcquin
closed
6 years ago
0
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