Error: processing vignette 'single_cell_analysis.Rmd' failed with diagnostics:
Path does not exist and create = FALSE
In addition: Warning message:
In tools::buildVignettes(dir = ".", tangle = TRUE) :
Files named as vignettes but with no recognized vignette engine:
‘vignettes/feature_distribution_analysis.Rmd’
(Is a VignetteBuilder field missing?)
Execution halted
Error: Command failed (1)
Comment from Shantanu:
Ah that was because we didn't intend for that to be a vignette but
rather a notebook, but somehow overlooked the fact that
install.packages() will try to build it.
shntnu
commented
7 years ago
installation in R 3.3.2 using
devtools::install_github("cytomining/cytominergallery", dependencies = TRUE, build_vignettes = TRUE)
fails with the following error log.
Error: processing vignette 'single_cell_analysis.Rmd' failed with diagnostics: Path does not exist and create = FALSE In addition: Warning message: In tools::buildVignettes(dir = ".", tangle = TRUE) : Files named as vignettes but with no recognized vignette engine: ‘vignettes/feature_distribution_analysis.Rmd’ (Is a VignetteBuilder field missing?) Execution halted Error: Command failed (1)
Comment from Shantanu:
Ah that was because we didn't intend for that to be a vignette but rather a notebook, but somehow overlooked the fact that install.packages() will try to build it.