Can't get node table for for WP186

cytoscape / RCy3

New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community

MIT License

50 stars 20 forks source link

Can't get node table for for WP186 #52

Closed ariutta closed 5 years ago

ariutta commented 5 years ago

Can't get node table for WP186:

wikipathwaysID <- 'WP186'
net.suid <- commandsGET(paste0('wikipathways import-as-pathway id="', wikipathwaysID, '"'))
# FROM WIKIPATHWAYS APP
tableColumns <- getTableColumns()

yields this error:

Error in x[[jj]][iseq] <- vjj: replacement has length zero

ariutta commented 5 years ago

Same error for WP2289 and WP4297.

AlexanderPico commented 5 years ago

Hmm... I could not reproduce this error. The tables for these pathways are returned without error. Are you using the release version of the WP app, version 3.3.7? Maybe it's an issue with a beta-dev version of the app?

AlexanderPico commented 5 years ago

I just tested WP app 3.3.76, for example, and those pathways don't seem to load at all! Suspect that beta-dev version of the app is buggy.