Closed kozo2 closed 4 years ago
> openSession(file.location = "http://nrnb.org/data/BasicDataVizDemo.cys") Opening http://nrnb.org/data/BasicDataVizDemo.cys... RCy3::commandsPOST, HTTP Error Code: 500 url=http://localhost:1234/v1/commands/session/open body={ "url": "http://nrnb.org/data/BasicDataVizDemo.cys" } Error in commandsPOST(paste0("session open ", type, "=\"", file.location, : Mark/Reset not supported. > sessionInfo() R version 3.6.1 (2019-07-05) Platform: x86_64-apple-darwin15.6.0 (64-bit) Running under: macOS Mojave 10.14.6 Matrix products: default BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib LAPACK: /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] RCy3_2.5.6 loaded via a namespace (and not attached): [1] igraph_1.2.4.1 graph_1.63.0 Rcpp_1.0.2 knitr_1.24 magrittr_1.5 BiocGenerics_0.31.5 [7] R6_2.4.0 stringr_1.4.0 httr_1.4.1 tools_3.6.1 parallel_3.6.1 xfun_0.9 [13] R.oo_1.22.0 htmltools_0.3.6 yaml_2.2.0 digest_0.6.20 RJSONIO_1.3-1.2 BiocManager_1.30.4 [19] base64enc_0.1-3 R.utils_2.9.0 curl_4.0 evaluate_0.14 rmarkdown_1.15 stringi_1.4.3 [25] compiler_3.6.1 R.methodsS3_1.7.1 stats4_3.6.1 XML_3.98-1.20 jsonlite_1.6 pkgconfig_2.0.2
Thanks for reporting this! It is an error in Cytoscape's implementation of the session open command. I've reported it here: https://cytoscape.atlassian.net/browse/CYTOSCAPE-12556
session open