major updates from large sample amounts - Githubissues

czbiohub-sf / MIDAS

Metagenomic Intra-Species Diversity Analysis (MIDAS)

MIT License

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major updates from large sample amounts #68

Closed zhaoc1 closed 2 years ago

zhaoc1 commented 2 years ago

robust chunk size for species with different prevalence
multiple filters to select species for SNPs flow
cache chunks