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czbiohub-sf / Rapid-QC-MS

Realtime quality control for mass spectrometry data acquisition
https://czbiohub-sf.github.io/Rapid-QC-MS
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google drive client error - Cannot mask with non-boolean array containing NA\NaN values #86

Open InventoRyAlpaca opened 11 months ago

InventoRyAlpaca commented 11 months ago

Seems to happen each time the client pulls info from drive, after the source updates with newly processed files.

Exception on /_dash-update-component [POST] Traceback (most recent call last): File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\flask\app.py", line 2529, in wsgi_app response = self.full_dispatch_request() File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\flask\app.py", line 1825, in full_dispatch_request rv = self.handle_user_exception(e) File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\flask\app.py", line 1823, in full_dispatch_request rv = self.dispatch_request() File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\flask\app.py", line 1799, in dispatch_request return self.ensure_sync(self.view_functions[rule.endpoint])(*view_args) File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\dash\dash.py", line 1259, in dispatch ctx.run( File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\dash_callback.py", line 439, in add_context output_value = func(func_args, **func_kwargs) # %% callback invoked %% File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\ms_autoqc\DashWebApp.py", line 2616, in apply_sample_filter_to_plots df_samples = df_samples.loc[df_samples["Polarity"].str.contains(polarity)] File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\pandas\core\indexing.py", line 967, in getitem return self._getitem_axis(maybe_callable, axis=axis) File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\pandas\core\indexing.py", line 1181, in _getitem_axis elif com.is_bool_indexer(key): File "c:\users\ira.gray\ms-autoqc-venv\py38_autoqc\lib\site-packages\pandas\core\common.py", line 144, in is_bool_indexer raise ValueError(na_msg) ValueError: Cannot mask with non-boolean array containing NA / NaN values

InventoRyAlpaca commented 11 months ago

Saw this with pandas 2.1.3 as well on python 3.12, I believe. But can't find the log now to confirm 100%.