Error executing process > 'diamond_prepare_taxa (taxdmp)'
Caused by:
Process `diamond_prepare_taxa (taxdmp)` terminated with an error exit status (9)
Command executed:
unzip taxdmp.zip
Command exit status:
9
Command output:
Archive: taxdmp.zip
Command error:
WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
End-of-central-directory signature not found. Either this file is not
a zipfile, or it constitutes one disk of a multi-part archive. In the
latter case the central directory and zipfile comment will be found on
the last disk(s) of this archive.
unzip: cannot find zipfile directory in one of taxdmp.zip or
taxdmp.zip.zip, and cannot find taxdmp.zip.ZIP, period.
Work dir:
/home/phoenix/code/nf-predictorthologs/work/3c/c7ceff90ab63d1d82189dd9fbfac13
Tip: you can replicate the issue by changing to the process work dir and entering the command `bash .command.run`
Using conda's
unzip
causes this error:Replace with apt-get's unzip