czbiohub-sf / nf-predictorthologs

*de novo* orthologous gene predictions from bam + bed or fasta/fastq data
MIT License
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ksize, molecule passing from csv into all processes #70

Closed pranathivemuri closed 4 years ago

pranathivemuri commented 4 years ago

nf-core/predictorthologs pull request

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olgabot commented 4 years ago

This PR moves the test_download_refseq test into a separate file allowing for failure and may help with getting the tests to pass faster: https://github.com/czbiohub/nf-predictorthologs/pull/66

pranathivemuri commented 4 years ago

closing this PR for now, will revisit once we have more clarity on what can be improved on figuring out the csv file parameters like ksize, molecule inside nextflow