czbiohub-sf / shrimPy

shrimPy: Smart High-throughput Robust Imaging & Measurement in Python
BSD 3-Clause "New" or "Revised" License
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Need a pipeline to easily append new channels to existing stores #84

Open edyoshikun opened 1 year ago

edyoshikun commented 1 year ago

Currently after most post processing, we save the reconstructed or processed data (i.e deskewing, registration #55 , reconstructions,etc) in separate zarr stores.

Iohub has the capability to append to existing stores, but we have not implemented a pipeline or simple function calls that allow us to do this easily.