search

czbiohub-sf / tabula-muris-senis

Tabula Muris Senis
http://tabula-muris-senis.ds.czbiohub.org
BSD 3-Clause "New" or "Revised" License
96 stars 27 forks source link

Question about data downloading #25

Closed vikki0816 closed 3 years ago

vikki0816 commented 3 years ago

Dear Tabula Muris team,

I'm trying to download the raw data from AWS, but I really confused with the file name of the datasets. I want to know the meaning of the subfolder name like "170907_A00111_0051_BH2HWLDMXX".

Futhermore, I only need raw data from brain cells in my study, but I could not figure out the brain cells. Could you please tell me how to distinguish the brain cells from other tissues according to the filename?

I really hope you can answer my question. Thanks a lot !

Sincerely, Vikki

aopisco commented 3 years ago

@vikki0816 unfortunately there is not an easy way to do this, my suggestion is for you to use the metadata files (s3://czb-tabula-muris-senis/Metadata/) and programmatically find your fastqs of interest