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czbiohub-sf / tabula-muris-senis

Tabula Muris Senis
http://tabula-muris-senis.ds.czbiohub.org
BSD 3-Clause "New" or "Revised" License
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Do I need to log-transform the Tabula Muris Senis Processed files (to use with scanpy) download from Figshare? #54

Closed saramorsy77 closed 1 week ago

saramorsy77 commented 2 months ago

Hi all,

I know that the Processed files (to use with scanpy) in Figshare are normalized but are they also log transformed?

Thanks a lot in advance

Sarah Morsy

aopisco commented 1 week ago

yes, normalized, log transformed and scaled